Gene : Lsat_1_v5_gn_5_67180 L. sativa V8
Defline:  (1 of 1) PTHR19384:SF54 - FERREDOXIN--NADP REDUCTASE, ROOT ISOZYME 1, CHLOROPLASTIC-RELATED Genomic Order:  1762
Name:  ? Lsat_1_v5_gn_5_67180 Secondary Identifier:  ? PAC:38969838
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PHOTOALL-PWY Lactuca sativa pathologic  
Lsativa PWY-101 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_67180 0.5kb upstream 0.5kb upstream 5557   true Lsat_1_v8_lg_5: 151603455-151609011 Lactuca sativa
Lsat_1_v5_gn_5_67180 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 151603455-151603954 Lactuca sativa
Lsat_1_v5_gn_5_67180 0.5kb downstream 0.5kb downstream 5557   true Lsat_1_v8_lg_5: 151603955-151609511 Lactuca sativa
Lsat_1_v5_gn_5_67180 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 151609012-151609511 Lactuca sativa
Lsat_1_v5_gn_5_67180 1.0kb upstream 1.0kb upstream 6057   true Lsat_1_v8_lg_5: 151602955-151609011 Lactuca sativa
Lsat_1_v5_gn_5_67180 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 151602955-151603954 Lactuca sativa
Lsat_1_v5_gn_5_67180 1.0kb downstream 1.0kb downstream 6057   true Lsat_1_v8_lg_5: 151603955-151610011 Lactuca sativa
Lsat_1_v5_gn_5_67180 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 151609012-151610011 Lactuca sativa
Lsat_1_v5_gn_5_67180 2.0kb upstream 2.0kb upstream 7057   true Lsat_1_v8_lg_5: 151601955-151609011 Lactuca sativa
Lsat_1_v5_gn_5_67180 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 151601955-151603954 Lactuca sativa
Lsat_1_v5_gn_5_67180 2.0kb downstream 2.0kb downstream 7057   true Lsat_1_v8_lg_5: 151603955-151611011 Lactuca sativa
Lsat_1_v5_gn_5_67180 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 151609012-151611011 Lactuca sativa
Lsat_1_v5_gn_5_67180 5.0kb upstream 5.0kb upstream 10057   true Lsat_1_v8_lg_5: 151598955-151609011 Lactuca sativa
Lsat_1_v5_gn_5_67180 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 151598955-151603954 Lactuca sativa
Lsat_1_v5_gn_5_67180 5.0kb downstream 5.0kb downstream 10057   true Lsat_1_v8_lg_5: 151603955-151614011 Lactuca sativa
Lsat_1_v5_gn_5_67180 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 151609012-151614011 Lactuca sativa
Lsat_1_v5_gn_5_67180 10.0kb upstream 10.0kb upstream 15057   true Lsat_1_v8_lg_5: 151593955-151609011 Lactuca sativa
Lsat_1_v5_gn_5_67180 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 151593955-151603954 Lactuca sativa
Lsat_1_v5_gn_5_67180 10.0kb downstream 10.0kb downstream 15057   true Lsat_1_v8_lg_5: 151603955-151619011 Lactuca sativa
Lsat_1_v5_gn_5_67180 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 151609012-151619011 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466681 5263 Asterids View MSA
123736625 5271 Pentapetalae View MSA
122790491 5272 Eudicot View MSA
122045006 5273 Angiosperm View MSA
121347443 5274 Embryophyte View MSA
123424825 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain