Gene : Lsat_1_v5_gn_5_71000 L. sativa V8
Defline:  (1 of 8) PTHR11709//PTHR11709:SF66 - MULTI-COPPER OXIDASE // LACCASE-17 Genomic Order:  1882
Name:  ? Lsat_1_v5_gn_5_71000 Secondary Identifier:  ? PAC:38966760
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-5466 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_71000 0.5kb upstream 0.5kb upstream 2745   true Lsat_1_v8_lg_5: 162145089-162147833 Lactuca sativa
Lsat_1_v5_gn_5_71000 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 162145089-162145588 Lactuca sativa
Lsat_1_v5_gn_5_71000 0.5kb downstream 0.5kb downstream 2745   true Lsat_1_v8_lg_5: 162145589-162148333 Lactuca sativa
Lsat_1_v5_gn_5_71000 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 162147834-162148333 Lactuca sativa
Lsat_1_v5_gn_5_71000 1.0kb upstream 1.0kb upstream 3245   true Lsat_1_v8_lg_5: 162144589-162147833 Lactuca sativa
Lsat_1_v5_gn_5_71000 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 162144589-162145588 Lactuca sativa
Lsat_1_v5_gn_5_71000 1.0kb downstream 1.0kb downstream 3245   true Lsat_1_v8_lg_5: 162145589-162148833 Lactuca sativa
Lsat_1_v5_gn_5_71000 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 162147834-162148833 Lactuca sativa
Lsat_1_v5_gn_5_71000 2.0kb upstream 2.0kb upstream 4245   true Lsat_1_v8_lg_5: 162143589-162147833 Lactuca sativa
Lsat_1_v5_gn_5_71000 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 162143589-162145588 Lactuca sativa
Lsat_1_v5_gn_5_71000 2.0kb downstream 2.0kb downstream 4245   true Lsat_1_v8_lg_5: 162145589-162149833 Lactuca sativa
Lsat_1_v5_gn_5_71000 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 162147834-162149833 Lactuca sativa
Lsat_1_v5_gn_5_71000 5.0kb upstream 5.0kb upstream 7245   true Lsat_1_v8_lg_5: 162140589-162147833 Lactuca sativa
Lsat_1_v5_gn_5_71000 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 162140589-162145588 Lactuca sativa
Lsat_1_v5_gn_5_71000 5.0kb downstream 5.0kb downstream 7245   true Lsat_1_v8_lg_5: 162145589-162152833 Lactuca sativa
Lsat_1_v5_gn_5_71000 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 162147834-162152833 Lactuca sativa
Lsat_1_v5_gn_5_71000 10.0kb upstream 10.0kb upstream 12245   true Lsat_1_v8_lg_5: 162135589-162147833 Lactuca sativa
Lsat_1_v5_gn_5_71000 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 162135589-162145588 Lactuca sativa
Lsat_1_v5_gn_5_71000 10.0kb downstream 10.0kb downstream 12245   true Lsat_1_v8_lg_5: 162145589-162157833 Lactuca sativa
Lsat_1_v5_gn_5_71000 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 162147834-162157833 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476270 5263 Asterids View MSA
123751220 5271 Pentapetalae View MSA
122795105 5272 Eudicot View MSA
122050716 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain