Gene : Lsat_1_v5_gn_5_73041 L. sativa V8
Defline:  (1 of 5) PTHR24007 - BRCA1-ASSOCIATED PROTEIN Genomic Order:  1923
Name:  ? Lsat_1_v5_gn_5_73041 Secondary Identifier:  ? PAC:38963621
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_73041 0.5kb upstream 0.5kb upstream 3240   true Lsat_1_v8_lg_5: 164973751-164976990 Lactuca sativa
Lsat_1_v5_gn_5_73041 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 164973751-164974250 Lactuca sativa
Lsat_1_v5_gn_5_73041 0.5kb downstream 0.5kb downstream 3240   true Lsat_1_v8_lg_5: 164974251-164977490 Lactuca sativa
Lsat_1_v5_gn_5_73041 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 164976991-164977490 Lactuca sativa
Lsat_1_v5_gn_5_73041 1.0kb upstream 1.0kb upstream 3740   true Lsat_1_v8_lg_5: 164973251-164976990 Lactuca sativa
Lsat_1_v5_gn_5_73041 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 164973251-164974250 Lactuca sativa
Lsat_1_v5_gn_5_73041 1.0kb downstream 1.0kb downstream 3740   true Lsat_1_v8_lg_5: 164974251-164977990 Lactuca sativa
Lsat_1_v5_gn_5_73041 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 164976991-164977990 Lactuca sativa
Lsat_1_v5_gn_5_73041 2.0kb upstream 2.0kb upstream 4740   true Lsat_1_v8_lg_5: 164972251-164976990 Lactuca sativa
Lsat_1_v5_gn_5_73041 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 164972251-164974250 Lactuca sativa
Lsat_1_v5_gn_5_73041 2.0kb downstream 2.0kb downstream 4740   true Lsat_1_v8_lg_5: 164974251-164978990 Lactuca sativa
Lsat_1_v5_gn_5_73041 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 164976991-164978990 Lactuca sativa
Lsat_1_v5_gn_5_73041 5.0kb upstream 5.0kb upstream 7740   true Lsat_1_v8_lg_5: 164969251-164976990 Lactuca sativa
Lsat_1_v5_gn_5_73041 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 164969251-164974250 Lactuca sativa
Lsat_1_v5_gn_5_73041 5.0kb downstream 5.0kb downstream 7740   true Lsat_1_v8_lg_5: 164974251-164981990 Lactuca sativa
Lsat_1_v5_gn_5_73041 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 164976991-164981990 Lactuca sativa
Lsat_1_v5_gn_5_73041 10.0kb upstream 10.0kb upstream 12740   true Lsat_1_v8_lg_5: 164964251-164976990 Lactuca sativa
Lsat_1_v5_gn_5_73041 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 164964251-164974250 Lactuca sativa
Lsat_1_v5_gn_5_73041 10.0kb downstream 10.0kb downstream 12740   true Lsat_1_v8_lg_5: 164974251-164986990 Lactuca sativa
Lsat_1_v5_gn_5_73041 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 164976991-164986990 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026595 5273 Angiosperm View MSA
121479099 5263 Asterids View MSA
123741826 5271 Pentapetalae View MSA
122792639 5272 Eudicot View MSA
123429159 5275 Viridiplantae View MSA
121296410 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain