Gene : Lsat_1_v5_gn_5_77601 L. sativa V8
Defline:  (1 of 4) K01915 - glutamine synthetase (glnA, GLUL) Genomic Order:  2047
Name:  ? Lsat_1_v5_gn_5_77601 Secondary Identifier:  ? PAC:38967638
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa GLNSYN-PWY Lactuca sativa pathologic  
Lsativa PWY-3282 Lactuca sativa pathologic  
Lsativa PWY-381 Lactuca sativa pathologic  
Lsativa PWY-6549 Lactuca sativa pathologic  
Lsativa PWY-6963 Lactuca sativa pathologic  
Lsativa PWY-6964 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_77601 0.5kb upstream 0.5kb upstream 6426   true Lsat_1_v8_lg_5: 176128658-176135083 Lactuca sativa
Lsat_1_v5_gn_5_77601 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 176134584-176135083 Lactuca sativa
Lsat_1_v5_gn_5_77601 0.5kb downstream 0.5kb downstream 6426   true Lsat_1_v8_lg_5: 176128158-176134583 Lactuca sativa
Lsat_1_v5_gn_5_77601 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 176128158-176128657 Lactuca sativa
Lsat_1_v5_gn_5_77601 1.0kb upstream 1.0kb upstream 6926   true Lsat_1_v8_lg_5: 176128658-176135583 Lactuca sativa
Lsat_1_v5_gn_5_77601 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 176134584-176135583 Lactuca sativa
Lsat_1_v5_gn_5_77601 1.0kb downstream 1.0kb downstream 6926   true Lsat_1_v8_lg_5: 176127658-176134583 Lactuca sativa
Lsat_1_v5_gn_5_77601 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 176127658-176128657 Lactuca sativa
Lsat_1_v5_gn_5_77601 2.0kb upstream 2.0kb upstream 7926   true Lsat_1_v8_lg_5: 176128658-176136583 Lactuca sativa
Lsat_1_v5_gn_5_77601 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 176134584-176136583 Lactuca sativa
Lsat_1_v5_gn_5_77601 2.0kb downstream 2.0kb downstream 7926   true Lsat_1_v8_lg_5: 176126658-176134583 Lactuca sativa
Lsat_1_v5_gn_5_77601 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 176126658-176128657 Lactuca sativa
Lsat_1_v5_gn_5_77601 5.0kb upstream 5.0kb upstream 10926   true Lsat_1_v8_lg_5: 176128658-176139583 Lactuca sativa
Lsat_1_v5_gn_5_77601 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 176134584-176139583 Lactuca sativa
Lsat_1_v5_gn_5_77601 5.0kb downstream 5.0kb downstream 10926   true Lsat_1_v8_lg_5: 176123658-176134583 Lactuca sativa
Lsat_1_v5_gn_5_77601 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 176123658-176128657 Lactuca sativa
Lsat_1_v5_gn_5_77601 10.0kb upstream 10.0kb upstream 15926   true Lsat_1_v8_lg_5: 176128658-176144583 Lactuca sativa
Lsat_1_v5_gn_5_77601 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 176134584-176144583 Lactuca sativa
Lsat_1_v5_gn_5_77601 10.0kb downstream 10.0kb downstream 15926   true Lsat_1_v8_lg_5: 176118658-176134583 Lactuca sativa
Lsat_1_v5_gn_5_77601 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 176118658-176128657 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471732 5263 Asterids View MSA
123741738 5271 Pentapetalae View MSA
122788688 5272 Eudicot View MSA
122046528 5273 Angiosperm View MSA
121310618 5274 Embryophyte View MSA
123428761 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain