Gene : Lsat_1_v5_gn_6_116440 L. sativa V8
Defline:  (1 of 4) PTHR22835//PTHR22835:SF153 - ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  3369
Name:  ? Lsat_1_v5_gn_6_116440 Secondary Identifier:  ? PAC:38937726
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa LIPAS-PWY Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_116440 0.5kb upstream 0.5kb upstream 2318   true Lsat_1_v8_lg_6: 189762315-189764632 Lactuca sativa
Lsat_1_v5_gn_6_116440 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 189762315-189762814 Lactuca sativa
Lsat_1_v5_gn_6_116440 0.5kb downstream 0.5kb downstream 2318   true Lsat_1_v8_lg_6: 189762815-189765132 Lactuca sativa
Lsat_1_v5_gn_6_116440 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 189764633-189765132 Lactuca sativa
Lsat_1_v5_gn_6_116440 1.0kb upstream 1.0kb upstream 2818   true Lsat_1_v8_lg_6: 189761815-189764632 Lactuca sativa
Lsat_1_v5_gn_6_116440 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 189761815-189762814 Lactuca sativa
Lsat_1_v5_gn_6_116440 1.0kb downstream 1.0kb downstream 2818   true Lsat_1_v8_lg_6: 189762815-189765632 Lactuca sativa
Lsat_1_v5_gn_6_116440 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 189764633-189765632 Lactuca sativa
Lsat_1_v5_gn_6_116440 2.0kb upstream 2.0kb upstream 3818   true Lsat_1_v8_lg_6: 189760815-189764632 Lactuca sativa
Lsat_1_v5_gn_6_116440 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 189760815-189762814 Lactuca sativa
Lsat_1_v5_gn_6_116440 2.0kb downstream 2.0kb downstream 3818   true Lsat_1_v8_lg_6: 189762815-189766632 Lactuca sativa
Lsat_1_v5_gn_6_116440 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 189764633-189766632 Lactuca sativa
Lsat_1_v5_gn_6_116440 5.0kb upstream 5.0kb upstream 6818   true Lsat_1_v8_lg_6: 189757815-189764632 Lactuca sativa
Lsat_1_v5_gn_6_116440 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 189757815-189762814 Lactuca sativa
Lsat_1_v5_gn_6_116440 5.0kb downstream 5.0kb downstream 6818   true Lsat_1_v8_lg_6: 189762815-189769632 Lactuca sativa
Lsat_1_v5_gn_6_116440 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 189764633-189769632 Lactuca sativa
Lsat_1_v5_gn_6_116440 10.0kb upstream 10.0kb upstream 11818   true Lsat_1_v8_lg_6: 189752815-189764632 Lactuca sativa
Lsat_1_v5_gn_6_116440 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 189752815-189762814 Lactuca sativa
Lsat_1_v5_gn_6_116440 10.0kb downstream 10.0kb downstream 11818   true Lsat_1_v8_lg_6: 189762815-189774632 Lactuca sativa
Lsat_1_v5_gn_6_116440 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 189764633-189774632 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121482587 5263 Asterids View MSA
123753785 5271 Pentapetalae View MSA
122797352 5272 Eudicot View MSA
122051674 5273 Angiosperm View MSA
121351762 5274 Embryophyte View MSA
123428079 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain