Gene : Lsat_1_v5_gn_6_12941 L. sativa V8
Defline:  (1 of 1) K14295 - nuclear pore complex protein Nup50 (NUP50, NPAP60) Genomic Order:  213
Name:  ? Lsat_1_v5_gn_6_12941 Secondary Identifier:  ? PAC:38939467
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_12941 0.5kb upstream 0.5kb upstream 2875   true Lsat_1_v8_lg_6: 10780038-10782912 Lactuca sativa
Lsat_1_v5_gn_6_12941 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 10780038-10780537 Lactuca sativa
Lsat_1_v5_gn_6_12941 0.5kb downstream 0.5kb downstream 2875   true Lsat_1_v8_lg_6: 10780538-10783412 Lactuca sativa
Lsat_1_v5_gn_6_12941 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 10782913-10783412 Lactuca sativa
Lsat_1_v5_gn_6_12941 1.0kb upstream 1.0kb upstream 3375   true Lsat_1_v8_lg_6: 10779538-10782912 Lactuca sativa
Lsat_1_v5_gn_6_12941 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 10779538-10780537 Lactuca sativa
Lsat_1_v5_gn_6_12941 1.0kb downstream 1.0kb downstream 3375   true Lsat_1_v8_lg_6: 10780538-10783912 Lactuca sativa
Lsat_1_v5_gn_6_12941 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 10782913-10783912 Lactuca sativa
Lsat_1_v5_gn_6_12941 2.0kb upstream 2.0kb upstream 4375   true Lsat_1_v8_lg_6: 10778538-10782912 Lactuca sativa
Lsat_1_v5_gn_6_12941 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 10778538-10780537 Lactuca sativa
Lsat_1_v5_gn_6_12941 2.0kb downstream 2.0kb downstream 4375   true Lsat_1_v8_lg_6: 10780538-10784912 Lactuca sativa
Lsat_1_v5_gn_6_12941 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 10782913-10784912 Lactuca sativa
Lsat_1_v5_gn_6_12941 5.0kb upstream 5.0kb upstream 7375   true Lsat_1_v8_lg_6: 10775538-10782912 Lactuca sativa
Lsat_1_v5_gn_6_12941 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 10775538-10780537 Lactuca sativa
Lsat_1_v5_gn_6_12941 5.0kb downstream 5.0kb downstream 7375   true Lsat_1_v8_lg_6: 10780538-10787912 Lactuca sativa
Lsat_1_v5_gn_6_12941 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 10782913-10787912 Lactuca sativa
Lsat_1_v5_gn_6_12941 10.0kb upstream 10.0kb upstream 12375   true Lsat_1_v8_lg_6: 10770538-10782912 Lactuca sativa
Lsat_1_v5_gn_6_12941 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 10770538-10780537 Lactuca sativa
Lsat_1_v5_gn_6_12941 10.0kb downstream 10.0kb downstream 12375   true Lsat_1_v8_lg_6: 10780538-10792912 Lactuca sativa
Lsat_1_v5_gn_6_12941 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 10782913-10792912 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471456 5263 Asterids View MSA
123739047 5271 Pentapetalae View MSA
122795467 5272 Eudicot View MSA
122048629 5273 Angiosperm View MSA
121344794 5274 Embryophyte View MSA
123425860 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain