Gene : Lsat_1_v5_gn_6_13820 L. sativa V8
Defline:  (1 of 1) PTHR10938//PTHR10938:SF2 - TRANSLATION INITIATION FACTOR IF-3 // SUBFAMILY NOT NAMED Genomic Order:  439
Name:  ? Lsat_1_v5_gn_6_13820 Secondary Identifier:  ? PAC:38940742
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_13820 0.5kb upstream 0.5kb upstream 2974   true Lsat_1_v8_lg_6: 18610488-18613461 Lactuca sativa
Lsat_1_v5_gn_6_13820 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 18612962-18613461 Lactuca sativa
Lsat_1_v5_gn_6_13820 0.5kb downstream 0.5kb downstream 2974   true Lsat_1_v8_lg_6: 18609988-18612961 Lactuca sativa
Lsat_1_v5_gn_6_13820 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 18609988-18610487 Lactuca sativa
Lsat_1_v5_gn_6_13820 1.0kb upstream 1.0kb upstream 3474   true Lsat_1_v8_lg_6: 18610488-18613961 Lactuca sativa
Lsat_1_v5_gn_6_13820 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 18612962-18613961 Lactuca sativa
Lsat_1_v5_gn_6_13820 1.0kb downstream 1.0kb downstream 3474   true Lsat_1_v8_lg_6: 18609488-18612961 Lactuca sativa
Lsat_1_v5_gn_6_13820 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 18609488-18610487 Lactuca sativa
Lsat_1_v5_gn_6_13820 2.0kb upstream 2.0kb upstream 4474   true Lsat_1_v8_lg_6: 18610488-18614961 Lactuca sativa
Lsat_1_v5_gn_6_13820 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 18612962-18614961 Lactuca sativa
Lsat_1_v5_gn_6_13820 2.0kb downstream 2.0kb downstream 4474   true Lsat_1_v8_lg_6: 18608488-18612961 Lactuca sativa
Lsat_1_v5_gn_6_13820 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 18608488-18610487 Lactuca sativa
Lsat_1_v5_gn_6_13820 5.0kb upstream 5.0kb upstream 7474   true Lsat_1_v8_lg_6: 18610488-18617961 Lactuca sativa
Lsat_1_v5_gn_6_13820 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 18612962-18617961 Lactuca sativa
Lsat_1_v5_gn_6_13820 5.0kb downstream 5.0kb downstream 7474   true Lsat_1_v8_lg_6: 18605488-18612961 Lactuca sativa
Lsat_1_v5_gn_6_13820 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 18605488-18610487 Lactuca sativa
Lsat_1_v5_gn_6_13820 10.0kb upstream 10.0kb upstream 12474   true Lsat_1_v8_lg_6: 18610488-18622961 Lactuca sativa
Lsat_1_v5_gn_6_13820 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 18612962-18622961 Lactuca sativa
Lsat_1_v5_gn_6_13820 10.0kb downstream 10.0kb downstream 12474   true Lsat_1_v8_lg_6: 18600488-18612961 Lactuca sativa
Lsat_1_v5_gn_6_13820 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 18600488-18610487 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473139 5263 Asterids View MSA
123743196 5271 Pentapetalae View MSA
122770560 5272 Eudicot View MSA
122049946 5273 Angiosperm View MSA
121349179 5274 Embryophyte View MSA
123425847 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain