Gene : Lsat_1_v5_gn_6_13540 L. sativa V8
Defline:  (1 of 3) K08955 - ATP-dependent metalloprotease [EC:3.4.24.-] (YME1) Genomic Order:  426
Name:  ? Lsat_1_v5_gn_6_13540 Secondary Identifier:  ? PAC:38940243
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_13540 0.5kb upstream 0.5kb upstream 6654   true Lsat_1_v8_lg_6: 17869858-17876511 Lactuca sativa
Lsat_1_v5_gn_6_13540 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 17869858-17870357 Lactuca sativa
Lsat_1_v5_gn_6_13540 0.5kb downstream 0.5kb downstream 6654   true Lsat_1_v8_lg_6: 17870358-17877011 Lactuca sativa
Lsat_1_v5_gn_6_13540 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 17876512-17877011 Lactuca sativa
Lsat_1_v5_gn_6_13540 1.0kb upstream 1.0kb upstream 7154   true Lsat_1_v8_lg_6: 17869358-17876511 Lactuca sativa
Lsat_1_v5_gn_6_13540 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 17869358-17870357 Lactuca sativa
Lsat_1_v5_gn_6_13540 1.0kb downstream 1.0kb downstream 7154   true Lsat_1_v8_lg_6: 17870358-17877511 Lactuca sativa
Lsat_1_v5_gn_6_13540 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 17876512-17877511 Lactuca sativa
Lsat_1_v5_gn_6_13540 2.0kb upstream 2.0kb upstream 8154   true Lsat_1_v8_lg_6: 17868358-17876511 Lactuca sativa
Lsat_1_v5_gn_6_13540 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 17868358-17870357 Lactuca sativa
Lsat_1_v5_gn_6_13540 2.0kb downstream 2.0kb downstream 8154   true Lsat_1_v8_lg_6: 17870358-17878511 Lactuca sativa
Lsat_1_v5_gn_6_13540 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 17876512-17878511 Lactuca sativa
Lsat_1_v5_gn_6_13540 5.0kb upstream 5.0kb upstream 11154   true Lsat_1_v8_lg_6: 17865358-17876511 Lactuca sativa
Lsat_1_v5_gn_6_13540 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 17865358-17870357 Lactuca sativa
Lsat_1_v5_gn_6_13540 5.0kb downstream 5.0kb downstream 11154   true Lsat_1_v8_lg_6: 17870358-17881511 Lactuca sativa
Lsat_1_v5_gn_6_13540 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 17876512-17881511 Lactuca sativa
Lsat_1_v5_gn_6_13540 10.0kb upstream 10.0kb upstream 16154   true Lsat_1_v8_lg_6: 17860358-17876511 Lactuca sativa
Lsat_1_v5_gn_6_13540 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 17860358-17870357 Lactuca sativa
Lsat_1_v5_gn_6_13540 10.0kb downstream 10.0kb downstream 16154   true Lsat_1_v8_lg_6: 17870358-17886511 Lactuca sativa
Lsat_1_v5_gn_6_13540 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 17876512-17886511 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471088 5263 Asterids View MSA
123744222 5271 Pentapetalae View MSA
122793624 5272 Eudicot View MSA
122043793 5273 Angiosperm View MSA
121346284 5274 Embryophyte View MSA
123428638 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain