Gene : Lsat_1_v5_gn_6_13521 L. sativa V8
Defline:  (1 of 1) 1.14.19.3 - Acyl-CoA 6-desaturase / Long-chain fatty acid Delta(6)-desaturase Genomic Order:  425
Name:  ? Lsat_1_v5_gn_6_13521 Secondary Identifier:  ? PAC:38939166
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-7601 Lactuca sativa pathologic  
Lsativa PWY-7606 Lactuca sativa pathologic  
Lsativa PWY-7726 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_13521 0.5kb upstream 0.5kb upstream 2239   true Lsat_1_v8_lg_6: 17836096-17838334 Lactuca sativa
Lsat_1_v5_gn_6_13521 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 17837835-17838334 Lactuca sativa
Lsat_1_v5_gn_6_13521 0.5kb downstream 0.5kb downstream 2239   true Lsat_1_v8_lg_6: 17835596-17837834 Lactuca sativa
Lsat_1_v5_gn_6_13521 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 17835596-17836095 Lactuca sativa
Lsat_1_v5_gn_6_13521 1.0kb upstream 1.0kb upstream 2739   true Lsat_1_v8_lg_6: 17836096-17838834 Lactuca sativa
Lsat_1_v5_gn_6_13521 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 17837835-17838834 Lactuca sativa
Lsat_1_v5_gn_6_13521 1.0kb downstream 1.0kb downstream 2739   true Lsat_1_v8_lg_6: 17835096-17837834 Lactuca sativa
Lsat_1_v5_gn_6_13521 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 17835096-17836095 Lactuca sativa
Lsat_1_v5_gn_6_13521 2.0kb upstream 2.0kb upstream 3739   true Lsat_1_v8_lg_6: 17836096-17839834 Lactuca sativa
Lsat_1_v5_gn_6_13521 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 17837835-17839834 Lactuca sativa
Lsat_1_v5_gn_6_13521 2.0kb downstream 2.0kb downstream 3739   true Lsat_1_v8_lg_6: 17834096-17837834 Lactuca sativa
Lsat_1_v5_gn_6_13521 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 17834096-17836095 Lactuca sativa
Lsat_1_v5_gn_6_13521 5.0kb upstream 5.0kb upstream 6739   true Lsat_1_v8_lg_6: 17836096-17842834 Lactuca sativa
Lsat_1_v5_gn_6_13521 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 17837835-17842834 Lactuca sativa
Lsat_1_v5_gn_6_13521 5.0kb downstream 5.0kb downstream 6739   true Lsat_1_v8_lg_6: 17831096-17837834 Lactuca sativa
Lsat_1_v5_gn_6_13521 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 17831096-17836095 Lactuca sativa
Lsat_1_v5_gn_6_13521 10.0kb upstream 10.0kb upstream 11739   true Lsat_1_v8_lg_6: 17836096-17847834 Lactuca sativa
Lsat_1_v5_gn_6_13521 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 17837835-17847834 Lactuca sativa
Lsat_1_v5_gn_6_13521 10.0kb downstream 10.0kb downstream 11739   true Lsat_1_v8_lg_6: 17826096-17837834 Lactuca sativa
Lsat_1_v5_gn_6_13521 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 17826096-17836095 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047499 5273 Angiosperm View MSA
121481243 5263 Asterids View MSA
123743417 5271 Pentapetalae View MSA
122792306 5272 Eudicot View MSA
121347259 5274 Embryophyte View MSA
123427370 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain