Gene : Lsat_1_v5_gn_6_14781 L. sativa V8
Defline:  (1 of 1) 2.1.3.3 - Ornithine carbamoyltransferase / OTCase Genomic Order:  456
Name:  ? Lsat_1_v5_gn_6_14781 Secondary Identifier:  ? PAC:38938844
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa ARGSYNBSUB-PWY Lactuca sativa pathologic  
Lsativa ARGSYN-PWY Lactuca sativa pathologic  
Lsativa CITRULBIO-PWY Lactuca sativa pathologic  
Lsativa CITRULLINE-DEG-PWY Lactuca sativa pathologic  
Lsativa PWY-4984 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_14781 0.5kb upstream 0.5kb upstream 3456   true Lsat_1_v8_lg_6: 19282193-19285648 Lactuca sativa
Lsat_1_v5_gn_6_14781 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 19282193-19282692 Lactuca sativa
Lsat_1_v5_gn_6_14781 0.5kb downstream 0.5kb downstream 3456   true Lsat_1_v8_lg_6: 19282693-19286148 Lactuca sativa
Lsat_1_v5_gn_6_14781 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 19285649-19286148 Lactuca sativa
Lsat_1_v5_gn_6_14781 1.0kb upstream 1.0kb upstream 3956   true Lsat_1_v8_lg_6: 19281693-19285648 Lactuca sativa
Lsat_1_v5_gn_6_14781 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 19281693-19282692 Lactuca sativa
Lsat_1_v5_gn_6_14781 1.0kb downstream 1.0kb downstream 3956   true Lsat_1_v8_lg_6: 19282693-19286648 Lactuca sativa
Lsat_1_v5_gn_6_14781 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 19285649-19286648 Lactuca sativa
Lsat_1_v5_gn_6_14781 2.0kb upstream 2.0kb upstream 4956   true Lsat_1_v8_lg_6: 19280693-19285648 Lactuca sativa
Lsat_1_v5_gn_6_14781 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 19280693-19282692 Lactuca sativa
Lsat_1_v5_gn_6_14781 2.0kb downstream 2.0kb downstream 4956   true Lsat_1_v8_lg_6: 19282693-19287648 Lactuca sativa
Lsat_1_v5_gn_6_14781 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 19285649-19287648 Lactuca sativa
Lsat_1_v5_gn_6_14781 5.0kb upstream 5.0kb upstream 7956   true Lsat_1_v8_lg_6: 19277693-19285648 Lactuca sativa
Lsat_1_v5_gn_6_14781 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 19277693-19282692 Lactuca sativa
Lsat_1_v5_gn_6_14781 5.0kb downstream 5.0kb downstream 7956   true Lsat_1_v8_lg_6: 19282693-19290648 Lactuca sativa
Lsat_1_v5_gn_6_14781 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 19285649-19290648 Lactuca sativa
Lsat_1_v5_gn_6_14781 10.0kb upstream 10.0kb upstream 12956   true Lsat_1_v8_lg_6: 19272693-19285648 Lactuca sativa
Lsat_1_v5_gn_6_14781 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 19272693-19282692 Lactuca sativa
Lsat_1_v5_gn_6_14781 10.0kb downstream 10.0kb downstream 12956   true Lsat_1_v8_lg_6: 19282693-19295648 Lactuca sativa
Lsat_1_v5_gn_6_14781 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 19285649-19295648 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477839 5263 Asterids View MSA
123736976 5271 Pentapetalae View MSA
122787582 5272 Eudicot View MSA
122042632 5273 Angiosperm View MSA
121351468 5274 Embryophyte View MSA
123427161 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain