Gene : Lsat_1_v5_gn_6_14601 L. sativa V8
Defline:  (1 of 11) PF05653 - Magnesium transporter NIPA (Mg_trans_NIPA) Genomic Order:  462
Name:  ? Lsat_1_v5_gn_6_14601 Secondary Identifier:  ? PAC:38939116
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_14601 0.5kb upstream 0.5kb upstream 3597   true Lsat_1_v8_lg_6: 19420570-19424166 Lactuca sativa
Lsat_1_v5_gn_6_14601 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 19420570-19421069 Lactuca sativa
Lsat_1_v5_gn_6_14601 0.5kb downstream 0.5kb downstream 3597   true Lsat_1_v8_lg_6: 19421070-19424666 Lactuca sativa
Lsat_1_v5_gn_6_14601 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 19424167-19424666 Lactuca sativa
Lsat_1_v5_gn_6_14601 1.0kb upstream 1.0kb upstream 4097   true Lsat_1_v8_lg_6: 19420070-19424166 Lactuca sativa
Lsat_1_v5_gn_6_14601 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 19420070-19421069 Lactuca sativa
Lsat_1_v5_gn_6_14601 1.0kb downstream 1.0kb downstream 4097   true Lsat_1_v8_lg_6: 19421070-19425166 Lactuca sativa
Lsat_1_v5_gn_6_14601 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 19424167-19425166 Lactuca sativa
Lsat_1_v5_gn_6_14601 2.0kb upstream 2.0kb upstream 5097   true Lsat_1_v8_lg_6: 19419070-19424166 Lactuca sativa
Lsat_1_v5_gn_6_14601 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 19419070-19421069 Lactuca sativa
Lsat_1_v5_gn_6_14601 2.0kb downstream 2.0kb downstream 5097   true Lsat_1_v8_lg_6: 19421070-19426166 Lactuca sativa
Lsat_1_v5_gn_6_14601 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 19424167-19426166 Lactuca sativa
Lsat_1_v5_gn_6_14601 5.0kb upstream 5.0kb upstream 8097   true Lsat_1_v8_lg_6: 19416070-19424166 Lactuca sativa
Lsat_1_v5_gn_6_14601 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 19416070-19421069 Lactuca sativa
Lsat_1_v5_gn_6_14601 5.0kb downstream 5.0kb downstream 8097   true Lsat_1_v8_lg_6: 19421070-19429166 Lactuca sativa
Lsat_1_v5_gn_6_14601 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 19424167-19429166 Lactuca sativa
Lsat_1_v5_gn_6_14601 10.0kb upstream 10.0kb upstream 13097   true Lsat_1_v8_lg_6: 19411070-19424166 Lactuca sativa
Lsat_1_v5_gn_6_14601 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 19411070-19421069 Lactuca sativa
Lsat_1_v5_gn_6_14601 10.0kb downstream 10.0kb downstream 13097   true Lsat_1_v8_lg_6: 19421070-19434166 Lactuca sativa
Lsat_1_v5_gn_6_14601 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 19424167-19434166 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468059 5263 Asterids View MSA
123737318 5271 Pentapetalae View MSA
122791606 5272 Eudicot View MSA
122046404 5273 Angiosperm View MSA
121346413 5274 Embryophyte View MSA
123423946 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain