Gene : Lsat_1_v5_gn_6_16821 L. sativa V8
Defline:  (1 of 1) PTHR20858//PTHR20858:SF18 - PHOSPHOMETHYLPYRIMIDINE KINASE // PROTEIN PET18 Genomic Order:  573
Name:  ? Lsat_1_v5_gn_6_16821 Secondary Identifier:  ? PAC:38940388
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_16821 0.5kb upstream 0.5kb upstream 1873   true Lsat_1_v8_lg_6: 22964267-22966139 Lactuca sativa
Lsat_1_v5_gn_6_16821 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 22965640-22966139 Lactuca sativa
Lsat_1_v5_gn_6_16821 0.5kb downstream 0.5kb downstream 1873   true Lsat_1_v8_lg_6: 22963767-22965639 Lactuca sativa
Lsat_1_v5_gn_6_16821 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 22963767-22964266 Lactuca sativa
Lsat_1_v5_gn_6_16821 1.0kb upstream 1.0kb upstream 2373   true Lsat_1_v8_lg_6: 22964267-22966639 Lactuca sativa
Lsat_1_v5_gn_6_16821 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 22965640-22966639 Lactuca sativa
Lsat_1_v5_gn_6_16821 1.0kb downstream 1.0kb downstream 2373   true Lsat_1_v8_lg_6: 22963267-22965639 Lactuca sativa
Lsat_1_v5_gn_6_16821 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 22963267-22964266 Lactuca sativa
Lsat_1_v5_gn_6_16821 2.0kb upstream 2.0kb upstream 3373   true Lsat_1_v8_lg_6: 22964267-22967639 Lactuca sativa
Lsat_1_v5_gn_6_16821 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 22965640-22967639 Lactuca sativa
Lsat_1_v5_gn_6_16821 2.0kb downstream 2.0kb downstream 3373   true Lsat_1_v8_lg_6: 22962267-22965639 Lactuca sativa
Lsat_1_v5_gn_6_16821 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 22962267-22964266 Lactuca sativa
Lsat_1_v5_gn_6_16821 5.0kb upstream 5.0kb upstream 6373   true Lsat_1_v8_lg_6: 22964267-22970639 Lactuca sativa
Lsat_1_v5_gn_6_16821 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 22965640-22970639 Lactuca sativa
Lsat_1_v5_gn_6_16821 5.0kb downstream 5.0kb downstream 6373   true Lsat_1_v8_lg_6: 22959267-22965639 Lactuca sativa
Lsat_1_v5_gn_6_16821 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 22959267-22964266 Lactuca sativa
Lsat_1_v5_gn_6_16821 10.0kb upstream 10.0kb upstream 11373   true Lsat_1_v8_lg_6: 22964267-22975639 Lactuca sativa
Lsat_1_v5_gn_6_16821 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 22965640-22975639 Lactuca sativa
Lsat_1_v5_gn_6_16821 10.0kb downstream 10.0kb downstream 11373   true Lsat_1_v8_lg_6: 22954267-22965639 Lactuca sativa
Lsat_1_v5_gn_6_16821 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 22954267-22964266 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471172 5263 Asterids View MSA
123738905 5271 Pentapetalae View MSA
122790615 5272 Eudicot View MSA
122042801 5273 Angiosperm View MSA
121348004 5274 Embryophyte View MSA
123425587 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain