Gene : Lsat_1_v5_gn_6_17901 L. sativa V8
Defline:  (1 of 4) 3.4.24.12 - Envelysin / Sea-urchin-hatching proteinase Genomic Order:  557
Name:  ? Lsat_1_v5_gn_6_17901 Secondary Identifier:  ? PAC:38937137
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_17901 0.5kb upstream 0.5kb upstream 1508   true Lsat_1_v8_lg_6: 22683482-22684989 Lactuca sativa
Lsat_1_v5_gn_6_17901 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 22684490-22684989 Lactuca sativa
Lsat_1_v5_gn_6_17901 0.5kb downstream 0.5kb downstream 1508   true Lsat_1_v8_lg_6: 22682982-22684489 Lactuca sativa
Lsat_1_v5_gn_6_17901 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 22682982-22683481 Lactuca sativa
Lsat_1_v5_gn_6_17901 1.0kb upstream 1.0kb upstream 2008   true Lsat_1_v8_lg_6: 22683482-22685489 Lactuca sativa
Lsat_1_v5_gn_6_17901 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 22684490-22685489 Lactuca sativa
Lsat_1_v5_gn_6_17901 1.0kb downstream 1.0kb downstream 2008   true Lsat_1_v8_lg_6: 22682482-22684489 Lactuca sativa
Lsat_1_v5_gn_6_17901 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 22682482-22683481 Lactuca sativa
Lsat_1_v5_gn_6_17901 2.0kb upstream 2.0kb upstream 3008   true Lsat_1_v8_lg_6: 22683482-22686489 Lactuca sativa
Lsat_1_v5_gn_6_17901 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 22684490-22686489 Lactuca sativa
Lsat_1_v5_gn_6_17901 2.0kb downstream 2.0kb downstream 3008   true Lsat_1_v8_lg_6: 22681482-22684489 Lactuca sativa
Lsat_1_v5_gn_6_17901 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 22681482-22683481 Lactuca sativa
Lsat_1_v5_gn_6_17901 5.0kb upstream 5.0kb upstream 6008   true Lsat_1_v8_lg_6: 22683482-22689489 Lactuca sativa
Lsat_1_v5_gn_6_17901 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 22684490-22689489 Lactuca sativa
Lsat_1_v5_gn_6_17901 5.0kb downstream 5.0kb downstream 6008   true Lsat_1_v8_lg_6: 22678482-22684489 Lactuca sativa
Lsat_1_v5_gn_6_17901 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 22678482-22683481 Lactuca sativa
Lsat_1_v5_gn_6_17901 10.0kb upstream 10.0kb upstream 11008   true Lsat_1_v8_lg_6: 22683482-22694489 Lactuca sativa
Lsat_1_v5_gn_6_17901 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 22684490-22694489 Lactuca sativa
Lsat_1_v5_gn_6_17901 10.0kb downstream 10.0kb downstream 11008   true Lsat_1_v8_lg_6: 22673482-22684489 Lactuca sativa
Lsat_1_v5_gn_6_17901 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 22673482-22683481 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469975 5263 Asterids View MSA
123748450 5271 Pentapetalae View MSA
122786815 5272 Eudicot View MSA
122041842 5273 Angiosperm View MSA
121350353 5274 Embryophyte View MSA
123381692 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain