Gene : Lsat_1_v5_gn_6_18741 L. sativa V8
Defline:  (1 of 1) K00811 - aspartate aminotransferase, chloroplastic (ASP5) Genomic Order:  614
Name:  ? Lsat_1_v5_gn_6_18741 Secondary Identifier:  ? PAC:38942073
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa ASPARTATE-DEG1-PWY Lactuca sativa pathologic  
Lsativa ASPARTATESYN-PWY Lactuca sativa pathologic  
Lsativa PWY-3001 Lactuca sativa pathologic  
Lsativa PWY-7115 Lactuca sativa pathologic  
Lsativa PWY-7117 Lactuca sativa pathologic  
Lsativa THRESYN-PWY Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_18741 0.5kb upstream 0.5kb upstream 5507   true Lsat_1_v8_lg_6: 26050040-26055546 Lactuca sativa
Lsat_1_v5_gn_6_18741 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 26050040-26050539 Lactuca sativa
Lsat_1_v5_gn_6_18741 0.5kb downstream 0.5kb downstream 5507   true Lsat_1_v8_lg_6: 26050540-26056046 Lactuca sativa
Lsat_1_v5_gn_6_18741 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 26055547-26056046 Lactuca sativa
Lsat_1_v5_gn_6_18741 1.0kb upstream 1.0kb upstream 6007   true Lsat_1_v8_lg_6: 26049540-26055546 Lactuca sativa
Lsat_1_v5_gn_6_18741 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 26049540-26050539 Lactuca sativa
Lsat_1_v5_gn_6_18741 1.0kb downstream 1.0kb downstream 6007   true Lsat_1_v8_lg_6: 26050540-26056546 Lactuca sativa
Lsat_1_v5_gn_6_18741 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 26055547-26056546 Lactuca sativa
Lsat_1_v5_gn_6_18741 2.0kb upstream 2.0kb upstream 7007   true Lsat_1_v8_lg_6: 26048540-26055546 Lactuca sativa
Lsat_1_v5_gn_6_18741 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 26048540-26050539 Lactuca sativa
Lsat_1_v5_gn_6_18741 2.0kb downstream 2.0kb downstream 7007   true Lsat_1_v8_lg_6: 26050540-26057546 Lactuca sativa
Lsat_1_v5_gn_6_18741 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 26055547-26057546 Lactuca sativa
Lsat_1_v5_gn_6_18741 5.0kb upstream 5.0kb upstream 10007   true Lsat_1_v8_lg_6: 26045540-26055546 Lactuca sativa
Lsat_1_v5_gn_6_18741 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 26045540-26050539 Lactuca sativa
Lsat_1_v5_gn_6_18741 5.0kb downstream 5.0kb downstream 10007   true Lsat_1_v8_lg_6: 26050540-26060546 Lactuca sativa
Lsat_1_v5_gn_6_18741 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 26055547-26060546 Lactuca sativa
Lsat_1_v5_gn_6_18741 10.0kb upstream 10.0kb upstream 15007   true Lsat_1_v8_lg_6: 26040540-26055546 Lactuca sativa
Lsat_1_v5_gn_6_18741 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 26040540-26050539 Lactuca sativa
Lsat_1_v5_gn_6_18741 10.0kb downstream 10.0kb downstream 15007   true Lsat_1_v8_lg_6: 26050540-26065546 Lactuca sativa
Lsat_1_v5_gn_6_18741 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 26055547-26065546 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474352 5263 Asterids View MSA
123740507 5271 Pentapetalae View MSA
122797537 5272 Eudicot View MSA
122048100 5273 Angiosperm View MSA
121346908 5274 Embryophyte View MSA
123424622 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain