Gene : Lsat_1_v5_gn_6_20280 L. sativa V8
Defline:  (1 of 1) KOG3306 - Predicted membrane protein Genomic Order:  638
Name:  ? Lsat_1_v5_gn_6_20280 Secondary Identifier:  ? PAC:38936634
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_20280 0.5kb upstream 0.5kb upstream 3862   true Lsat_1_v8_lg_6: 27111471-27115332 Lactuca sativa
Lsat_1_v5_gn_6_20280 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 27114833-27115332 Lactuca sativa
Lsat_1_v5_gn_6_20280 0.5kb downstream 0.5kb downstream 3862   true Lsat_1_v8_lg_6: 27110971-27114832 Lactuca sativa
Lsat_1_v5_gn_6_20280 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 27110971-27111470 Lactuca sativa
Lsat_1_v5_gn_6_20280 1.0kb upstream 1.0kb upstream 4362   true Lsat_1_v8_lg_6: 27111471-27115832 Lactuca sativa
Lsat_1_v5_gn_6_20280 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 27114833-27115832 Lactuca sativa
Lsat_1_v5_gn_6_20280 1.0kb downstream 1.0kb downstream 4362   true Lsat_1_v8_lg_6: 27110471-27114832 Lactuca sativa
Lsat_1_v5_gn_6_20280 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 27110471-27111470 Lactuca sativa
Lsat_1_v5_gn_6_20280 2.0kb upstream 2.0kb upstream 5362   true Lsat_1_v8_lg_6: 27111471-27116832 Lactuca sativa
Lsat_1_v5_gn_6_20280 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 27114833-27116832 Lactuca sativa
Lsat_1_v5_gn_6_20280 2.0kb downstream 2.0kb downstream 5362   true Lsat_1_v8_lg_6: 27109471-27114832 Lactuca sativa
Lsat_1_v5_gn_6_20280 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 27109471-27111470 Lactuca sativa
Lsat_1_v5_gn_6_20280 5.0kb upstream 5.0kb upstream 8362   true Lsat_1_v8_lg_6: 27111471-27119832 Lactuca sativa
Lsat_1_v5_gn_6_20280 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 27114833-27119832 Lactuca sativa
Lsat_1_v5_gn_6_20280 5.0kb downstream 5.0kb downstream 8362   true Lsat_1_v8_lg_6: 27106471-27114832 Lactuca sativa
Lsat_1_v5_gn_6_20280 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 27106471-27111470 Lactuca sativa
Lsat_1_v5_gn_6_20280 10.0kb upstream 10.0kb upstream 13362   true Lsat_1_v8_lg_6: 27111471-27124832 Lactuca sativa
Lsat_1_v5_gn_6_20280 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 27114833-27124832 Lactuca sativa
Lsat_1_v5_gn_6_20280 10.0kb downstream 10.0kb downstream 13362   true Lsat_1_v8_lg_6: 27101471-27114832 Lactuca sativa
Lsat_1_v5_gn_6_20280 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 27101471-27111470 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476129 5263 Asterids View MSA
123750181 5271 Pentapetalae View MSA
122793611 5272 Eudicot View MSA
122047015 5273 Angiosperm View MSA
121345754 5274 Embryophyte View MSA
123424414 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain