Gene : Lsat_1_v5_gn_6_22181 L. sativa V8
Defline:  (1 of 1) 2.1.1.204 - tRNA (cytosine(38)-C(5))-methyltransferase Genomic Order:  682
Name:  ? Lsat_1_v5_gn_6_22181 Secondary Identifier:  ? PAC:38939231
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_22181 0.5kb upstream 0.5kb upstream 3810   true Lsat_1_v8_lg_6: 28578886-28582695 Lactuca sativa
Lsat_1_v5_gn_6_22181 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 28578886-28579385 Lactuca sativa
Lsat_1_v5_gn_6_22181 0.5kb downstream 0.5kb downstream 3810   true Lsat_1_v8_lg_6: 28579386-28583195 Lactuca sativa
Lsat_1_v5_gn_6_22181 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 28582696-28583195 Lactuca sativa
Lsat_1_v5_gn_6_22181 1.0kb upstream 1.0kb upstream 4310   true Lsat_1_v8_lg_6: 28578386-28582695 Lactuca sativa
Lsat_1_v5_gn_6_22181 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 28578386-28579385 Lactuca sativa
Lsat_1_v5_gn_6_22181 1.0kb downstream 1.0kb downstream 4310   true Lsat_1_v8_lg_6: 28579386-28583695 Lactuca sativa
Lsat_1_v5_gn_6_22181 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 28582696-28583695 Lactuca sativa
Lsat_1_v5_gn_6_22181 2.0kb upstream 2.0kb upstream 5310   true Lsat_1_v8_lg_6: 28577386-28582695 Lactuca sativa
Lsat_1_v5_gn_6_22181 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 28577386-28579385 Lactuca sativa
Lsat_1_v5_gn_6_22181 2.0kb downstream 2.0kb downstream 5310   true Lsat_1_v8_lg_6: 28579386-28584695 Lactuca sativa
Lsat_1_v5_gn_6_22181 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 28582696-28584695 Lactuca sativa
Lsat_1_v5_gn_6_22181 5.0kb upstream 5.0kb upstream 8310   true Lsat_1_v8_lg_6: 28574386-28582695 Lactuca sativa
Lsat_1_v5_gn_6_22181 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 28574386-28579385 Lactuca sativa
Lsat_1_v5_gn_6_22181 5.0kb downstream 5.0kb downstream 8310   true Lsat_1_v8_lg_6: 28579386-28587695 Lactuca sativa
Lsat_1_v5_gn_6_22181 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 28582696-28587695 Lactuca sativa
Lsat_1_v5_gn_6_22181 10.0kb upstream 10.0kb upstream 13310   true Lsat_1_v8_lg_6: 28569386-28582695 Lactuca sativa
Lsat_1_v5_gn_6_22181 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 28569386-28579385 Lactuca sativa
Lsat_1_v5_gn_6_22181 10.0kb downstream 10.0kb downstream 13310   true Lsat_1_v8_lg_6: 28579386-28592695 Lactuca sativa
Lsat_1_v5_gn_6_22181 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 28582696-28592695 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473429 5263 Asterids View MSA
123740038 5271 Pentapetalae View MSA
122790174 5272 Eudicot View MSA
122042989 5273 Angiosperm View MSA
121345070 5274 Embryophyte View MSA
123423972 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain