Gene : Lsat_1_v5_gn_6_23181 L. sativa V8
Defline:  (1 of 2) 1.13.11.69//1.13.11.70 - Carlactone synthase // All-trans-10'-apo-beta-carotenal 13,14-cleaving dioxygenase / Carotenoid cleavage dioxygenase 8 Genomic Order:  718
Name:  ? Lsat_1_v5_gn_6_23181 Secondary Identifier:  ? PAC:38939916
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-7101 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_23181 0.5kb upstream 0.5kb upstream 4945   true Lsat_1_v8_lg_6: 30289358-30294302 Lactuca sativa
Lsat_1_v5_gn_6_23181 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 30293803-30294302 Lactuca sativa
Lsat_1_v5_gn_6_23181 0.5kb downstream 0.5kb downstream 4945   true Lsat_1_v8_lg_6: 30288858-30293802 Lactuca sativa
Lsat_1_v5_gn_6_23181 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 30288858-30289357 Lactuca sativa
Lsat_1_v5_gn_6_23181 1.0kb upstream 1.0kb upstream 5445   true Lsat_1_v8_lg_6: 30289358-30294802 Lactuca sativa
Lsat_1_v5_gn_6_23181 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 30293803-30294802 Lactuca sativa
Lsat_1_v5_gn_6_23181 1.0kb downstream 1.0kb downstream 5445   true Lsat_1_v8_lg_6: 30288358-30293802 Lactuca sativa
Lsat_1_v5_gn_6_23181 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 30288358-30289357 Lactuca sativa
Lsat_1_v5_gn_6_23181 2.0kb upstream 2.0kb upstream 6445   true Lsat_1_v8_lg_6: 30289358-30295802 Lactuca sativa
Lsat_1_v5_gn_6_23181 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 30293803-30295802 Lactuca sativa
Lsat_1_v5_gn_6_23181 2.0kb downstream 2.0kb downstream 6445   true Lsat_1_v8_lg_6: 30287358-30293802 Lactuca sativa
Lsat_1_v5_gn_6_23181 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 30287358-30289357 Lactuca sativa
Lsat_1_v5_gn_6_23181 5.0kb upstream 5.0kb upstream 9445   true Lsat_1_v8_lg_6: 30289358-30298802 Lactuca sativa
Lsat_1_v5_gn_6_23181 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 30293803-30298802 Lactuca sativa
Lsat_1_v5_gn_6_23181 5.0kb downstream 5.0kb downstream 9445   true Lsat_1_v8_lg_6: 30284358-30293802 Lactuca sativa
Lsat_1_v5_gn_6_23181 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 30284358-30289357 Lactuca sativa
Lsat_1_v5_gn_6_23181 10.0kb upstream 10.0kb upstream 14445   true Lsat_1_v8_lg_6: 30289358-30303802 Lactuca sativa
Lsat_1_v5_gn_6_23181 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 30293803-30303802 Lactuca sativa
Lsat_1_v5_gn_6_23181 10.0kb downstream 10.0kb downstream 14445   true Lsat_1_v8_lg_6: 30279358-30293802 Lactuca sativa
Lsat_1_v5_gn_6_23181 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 30279358-30289357 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476432 5263 Asterids View MSA
123738795 5271 Pentapetalae View MSA
122791259 5272 Eudicot View MSA
122048984 5273 Angiosperm View MSA
123428919 5275 Viridiplantae View MSA
121344649 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain