Gene : Lsat_1_v5_gn_6_25220 L. sativa V8
Defline:  (1 of 8) PF08137 - DVL family (DVL) Genomic Order:  794
Name:  ? Lsat_1_v5_gn_6_25220 Secondary Identifier:  ? PAC:38936661
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_25220 0.5kb upstream 0.5kb upstream 922   true Lsat_1_v8_lg_6: 34498153-34499074 Lactuca sativa
Lsat_1_v5_gn_6_25220 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 34498575-34499074 Lactuca sativa
Lsat_1_v5_gn_6_25220 0.5kb downstream 0.5kb downstream 922   true Lsat_1_v8_lg_6: 34497653-34498574 Lactuca sativa
Lsat_1_v5_gn_6_25220 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 34497653-34498152 Lactuca sativa
Lsat_1_v5_gn_6_25220 1.0kb upstream 1.0kb upstream 1422   true Lsat_1_v8_lg_6: 34498153-34499574 Lactuca sativa
Lsat_1_v5_gn_6_25220 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 34498575-34499574 Lactuca sativa
Lsat_1_v5_gn_6_25220 1.0kb downstream 1.0kb downstream 1422   true Lsat_1_v8_lg_6: 34497153-34498574 Lactuca sativa
Lsat_1_v5_gn_6_25220 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 34497153-34498152 Lactuca sativa
Lsat_1_v5_gn_6_25220 2.0kb upstream 2.0kb upstream 2422   true Lsat_1_v8_lg_6: 34498153-34500574 Lactuca sativa
Lsat_1_v5_gn_6_25220 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 34498575-34500574 Lactuca sativa
Lsat_1_v5_gn_6_25220 2.0kb downstream 2.0kb downstream 2422   true Lsat_1_v8_lg_6: 34496153-34498574 Lactuca sativa
Lsat_1_v5_gn_6_25220 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 34496153-34498152 Lactuca sativa
Lsat_1_v5_gn_6_25220 5.0kb upstream 5.0kb upstream 5422   true Lsat_1_v8_lg_6: 34498153-34503574 Lactuca sativa
Lsat_1_v5_gn_6_25220 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 34498575-34503574 Lactuca sativa
Lsat_1_v5_gn_6_25220 5.0kb downstream 5.0kb downstream 5422   true Lsat_1_v8_lg_6: 34493153-34498574 Lactuca sativa
Lsat_1_v5_gn_6_25220 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 34493153-34498152 Lactuca sativa
Lsat_1_v5_gn_6_25220 10.0kb upstream 10.0kb upstream 10422   true Lsat_1_v8_lg_6: 34498153-34508574 Lactuca sativa
Lsat_1_v5_gn_6_25220 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 34498575-34508574 Lactuca sativa
Lsat_1_v5_gn_6_25220 10.0kb downstream 10.0kb downstream 10422   true Lsat_1_v8_lg_6: 34488153-34498574 Lactuca sativa
Lsat_1_v5_gn_6_25220 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 34488153-34498152 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121446241 5263 Asterids Singleton cluster - no MSA
123751811 5271 Pentapetalae View MSA
122789066 5272 Eudicot View MSA
122048565 5273 Angiosperm View MSA
121346075 5274 Embryophyte View MSA
123380321 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain