Gene : Lsat_1_v5_gn_6_24941 L. sativa V8
Defline:  (1 of 1) PTHR36738:SF1 - EXPRESSED PROTEIN Genomic Order:  804
Name:  ? Lsat_1_v5_gn_6_24941 Secondary Identifier:  ? PAC:38937801
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_24941 0.5kb upstream 0.5kb upstream 2784   true Lsat_1_v8_lg_6: 34760311-34763094 Lactuca sativa
Lsat_1_v5_gn_6_24941 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 34760311-34760810 Lactuca sativa
Lsat_1_v5_gn_6_24941 0.5kb downstream 0.5kb downstream 2784   true Lsat_1_v8_lg_6: 34760811-34763594 Lactuca sativa
Lsat_1_v5_gn_6_24941 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 34763095-34763594 Lactuca sativa
Lsat_1_v5_gn_6_24941 1.0kb upstream 1.0kb upstream 3284   true Lsat_1_v8_lg_6: 34759811-34763094 Lactuca sativa
Lsat_1_v5_gn_6_24941 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 34759811-34760810 Lactuca sativa
Lsat_1_v5_gn_6_24941 1.0kb downstream 1.0kb downstream 3284   true Lsat_1_v8_lg_6: 34760811-34764094 Lactuca sativa
Lsat_1_v5_gn_6_24941 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 34763095-34764094 Lactuca sativa
Lsat_1_v5_gn_6_24941 2.0kb upstream 2.0kb upstream 4284   true Lsat_1_v8_lg_6: 34758811-34763094 Lactuca sativa
Lsat_1_v5_gn_6_24941 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 34758811-34760810 Lactuca sativa
Lsat_1_v5_gn_6_24941 2.0kb downstream 2.0kb downstream 4284   true Lsat_1_v8_lg_6: 34760811-34765094 Lactuca sativa
Lsat_1_v5_gn_6_24941 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 34763095-34765094 Lactuca sativa
Lsat_1_v5_gn_6_24941 5.0kb upstream 5.0kb upstream 7284   true Lsat_1_v8_lg_6: 34755811-34763094 Lactuca sativa
Lsat_1_v5_gn_6_24941 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 34755811-34760810 Lactuca sativa
Lsat_1_v5_gn_6_24941 5.0kb downstream 5.0kb downstream 7284   true Lsat_1_v8_lg_6: 34760811-34768094 Lactuca sativa
Lsat_1_v5_gn_6_24941 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 34763095-34768094 Lactuca sativa
Lsat_1_v5_gn_6_24941 10.0kb upstream 10.0kb upstream 12284   true Lsat_1_v8_lg_6: 34750811-34763094 Lactuca sativa
Lsat_1_v5_gn_6_24941 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 34750811-34760810 Lactuca sativa
Lsat_1_v5_gn_6_24941 10.0kb downstream 10.0kb downstream 12284   true Lsat_1_v8_lg_6: 34760811-34773094 Lactuca sativa
Lsat_1_v5_gn_6_24941 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 34763095-34773094 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041422 5273 Angiosperm View MSA
121474149 5263 Asterids View MSA
123751922 5271 Pentapetalae View MSA
122793004 5272 Eudicot View MSA
121347775 5274 Embryophyte View MSA
123423846 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain