Gene : Lsat_1_v5_gn_6_25741 L. sativa V8
Defline:  (1 of 3) PTHR19241//PTHR19241:SF247 - ATP-BINDING CASSETTE TRANSPORTER // SUBFAMILY NOT NAMED Genomic Order:  780
Name:  ? Lsat_1_v5_gn_6_25741 Secondary Identifier:  ? PAC:38937051
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_25741 0.5kb upstream 0.5kb upstream 5671   true Lsat_1_v8_lg_6: 33633748-33639418 Lactuca sativa
Lsat_1_v5_gn_6_25741 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 33633748-33634247 Lactuca sativa
Lsat_1_v5_gn_6_25741 0.5kb downstream 0.5kb downstream 5671   true Lsat_1_v8_lg_6: 33634248-33639918 Lactuca sativa
Lsat_1_v5_gn_6_25741 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 33639419-33639918 Lactuca sativa
Lsat_1_v5_gn_6_25741 1.0kb upstream 1.0kb upstream 6171   true Lsat_1_v8_lg_6: 33633248-33639418 Lactuca sativa
Lsat_1_v5_gn_6_25741 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 33633248-33634247 Lactuca sativa
Lsat_1_v5_gn_6_25741 1.0kb downstream 1.0kb downstream 6171   true Lsat_1_v8_lg_6: 33634248-33640418 Lactuca sativa
Lsat_1_v5_gn_6_25741 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 33639419-33640418 Lactuca sativa
Lsat_1_v5_gn_6_25741 2.0kb upstream 2.0kb upstream 7171   true Lsat_1_v8_lg_6: 33632248-33639418 Lactuca sativa
Lsat_1_v5_gn_6_25741 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 33632248-33634247 Lactuca sativa
Lsat_1_v5_gn_6_25741 2.0kb downstream 2.0kb downstream 7171   true Lsat_1_v8_lg_6: 33634248-33641418 Lactuca sativa
Lsat_1_v5_gn_6_25741 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 33639419-33641418 Lactuca sativa
Lsat_1_v5_gn_6_25741 5.0kb upstream 5.0kb upstream 10171   true Lsat_1_v8_lg_6: 33629248-33639418 Lactuca sativa
Lsat_1_v5_gn_6_25741 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 33629248-33634247 Lactuca sativa
Lsat_1_v5_gn_6_25741 5.0kb downstream 5.0kb downstream 10171   true Lsat_1_v8_lg_6: 33634248-33644418 Lactuca sativa
Lsat_1_v5_gn_6_25741 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 33639419-33644418 Lactuca sativa
Lsat_1_v5_gn_6_25741 10.0kb upstream 10.0kb upstream 15171   true Lsat_1_v8_lg_6: 33624248-33639418 Lactuca sativa
Lsat_1_v5_gn_6_25741 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 33624248-33634247 Lactuca sativa
Lsat_1_v5_gn_6_25741 10.0kb downstream 10.0kb downstream 15171   true Lsat_1_v8_lg_6: 33634248-33649418 Lactuca sativa
Lsat_1_v5_gn_6_25741 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 33639419-33649418 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466564 5263 Asterids View MSA
123743118 5271 Pentapetalae View MSA
122785890 5272 Eudicot View MSA
122043549 5273 Angiosperm View MSA
123428903 5275 Viridiplantae View MSA
121351020 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain