Gene : Lsat_1_v5_gn_6_25660 L. sativa V8
Defline:  (1 of 1) K14849 - ribosomal RNA-processing protein 1 (RRP1) Genomic Order:  783
Name:  ? Lsat_1_v5_gn_6_25660 Secondary Identifier:  ? PAC:38939019
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_25660 0.5kb upstream 0.5kb upstream 2439   true Lsat_1_v8_lg_6: 33892915-33895353 Lactuca sativa
Lsat_1_v5_gn_6_25660 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 33894854-33895353 Lactuca sativa
Lsat_1_v5_gn_6_25660 0.5kb downstream 0.5kb downstream 2439   true Lsat_1_v8_lg_6: 33892415-33894853 Lactuca sativa
Lsat_1_v5_gn_6_25660 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 33892415-33892914 Lactuca sativa
Lsat_1_v5_gn_6_25660 1.0kb upstream 1.0kb upstream 2939   true Lsat_1_v8_lg_6: 33892915-33895853 Lactuca sativa
Lsat_1_v5_gn_6_25660 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 33894854-33895853 Lactuca sativa
Lsat_1_v5_gn_6_25660 1.0kb downstream 1.0kb downstream 2939   true Lsat_1_v8_lg_6: 33891915-33894853 Lactuca sativa
Lsat_1_v5_gn_6_25660 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 33891915-33892914 Lactuca sativa
Lsat_1_v5_gn_6_25660 2.0kb upstream 2.0kb upstream 3939   true Lsat_1_v8_lg_6: 33892915-33896853 Lactuca sativa
Lsat_1_v5_gn_6_25660 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 33894854-33896853 Lactuca sativa
Lsat_1_v5_gn_6_25660 2.0kb downstream 2.0kb downstream 3939   true Lsat_1_v8_lg_6: 33890915-33894853 Lactuca sativa
Lsat_1_v5_gn_6_25660 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 33890915-33892914 Lactuca sativa
Lsat_1_v5_gn_6_25660 5.0kb upstream 5.0kb upstream 6939   true Lsat_1_v8_lg_6: 33892915-33899853 Lactuca sativa
Lsat_1_v5_gn_6_25660 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 33894854-33899853 Lactuca sativa
Lsat_1_v5_gn_6_25660 5.0kb downstream 5.0kb downstream 6939   true Lsat_1_v8_lg_6: 33887915-33894853 Lactuca sativa
Lsat_1_v5_gn_6_25660 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 33887915-33892914 Lactuca sativa
Lsat_1_v5_gn_6_25660 10.0kb upstream 10.0kb upstream 11939   true Lsat_1_v8_lg_6: 33892915-33904853 Lactuca sativa
Lsat_1_v5_gn_6_25660 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 33894854-33904853 Lactuca sativa
Lsat_1_v5_gn_6_25660 10.0kb downstream 10.0kb downstream 11939   true Lsat_1_v8_lg_6: 33882915-33894853 Lactuca sativa
Lsat_1_v5_gn_6_25660 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 33882915-33892914 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041241 5273 Angiosperm View MSA
121467654 5263 Asterids View MSA
123737116 5271 Pentapetalae View MSA
122788031 5272 Eudicot View MSA
121344172 5274 Embryophyte View MSA
123424078 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain