Gene : Lsat_1_v5_gn_6_27941 L. sativa V8
Defline:  (1 of 10) PTHR27001//PTHR27001:SF29 - FAMILY NOT NAMED // PROTEIN KINASE FAMILY PROTEIN-RELATED Genomic Order:  887
Name:  ? Lsat_1_v5_gn_6_27941 Secondary Identifier:  ? PAC:38939123
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_27941 0.5kb upstream 0.5kb upstream 7501   true Lsat_1_v8_lg_6: 38214696-38222196 Lactuca sativa
Lsat_1_v5_gn_6_27941 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 38221697-38222196 Lactuca sativa
Lsat_1_v5_gn_6_27941 0.5kb downstream 0.5kb downstream 7501   true Lsat_1_v8_lg_6: 38214196-38221696 Lactuca sativa
Lsat_1_v5_gn_6_27941 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 38214196-38214695 Lactuca sativa
Lsat_1_v5_gn_6_27941 1.0kb upstream 1.0kb upstream 8001   true Lsat_1_v8_lg_6: 38214696-38222696 Lactuca sativa
Lsat_1_v5_gn_6_27941 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 38221697-38222696 Lactuca sativa
Lsat_1_v5_gn_6_27941 1.0kb downstream 1.0kb downstream 8001   true Lsat_1_v8_lg_6: 38213696-38221696 Lactuca sativa
Lsat_1_v5_gn_6_27941 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 38213696-38214695 Lactuca sativa
Lsat_1_v5_gn_6_27941 2.0kb upstream 2.0kb upstream 9001   true Lsat_1_v8_lg_6: 38214696-38223696 Lactuca sativa
Lsat_1_v5_gn_6_27941 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 38221697-38223696 Lactuca sativa
Lsat_1_v5_gn_6_27941 2.0kb downstream 2.0kb downstream 9001   true Lsat_1_v8_lg_6: 38212696-38221696 Lactuca sativa
Lsat_1_v5_gn_6_27941 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 38212696-38214695 Lactuca sativa
Lsat_1_v5_gn_6_27941 5.0kb upstream 5.0kb upstream 12001   true Lsat_1_v8_lg_6: 38214696-38226696 Lactuca sativa
Lsat_1_v5_gn_6_27941 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 38221697-38226696 Lactuca sativa
Lsat_1_v5_gn_6_27941 5.0kb downstream 5.0kb downstream 12001   true Lsat_1_v8_lg_6: 38209696-38221696 Lactuca sativa
Lsat_1_v5_gn_6_27941 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 38209696-38214695 Lactuca sativa
Lsat_1_v5_gn_6_27941 10.0kb upstream 10.0kb upstream 17001   true Lsat_1_v8_lg_6: 38214696-38231696 Lactuca sativa
Lsat_1_v5_gn_6_27941 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 38221697-38231696 Lactuca sativa
Lsat_1_v5_gn_6_27941 10.0kb downstream 10.0kb downstream 17001   true Lsat_1_v8_lg_6: 38204696-38221696 Lactuca sativa
Lsat_1_v5_gn_6_27941 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 38204696-38214695 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481562 5263 Asterids View MSA
123752129 5271 Pentapetalae View MSA
122792935 5272 Eudicot View MSA
122046245 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350468 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain