Gene : Lsat_1_v5_gn_5_9980 L. sativa V8
Defline:  (1 of 2) PTHR31384//PTHR31384:SF8 - FAMILY NOT NAMED // AUXIN RESPONSE FACTOR 2 Genomic Order:  291
Name:  ? Lsat_1_v5_gn_5_9980 Secondary Identifier:  ? PAC:38971222
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_9980 0.5kb upstream 0.5kb upstream 4900   true Lsat_1_v8_lg_5: 20298446-20303345 Lactuca sativa
Lsat_1_v5_gn_5_9980 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 20298446-20298945 Lactuca sativa
Lsat_1_v5_gn_5_9980 0.5kb downstream 0.5kb downstream 4900   true Lsat_1_v8_lg_5: 20298946-20303845 Lactuca sativa
Lsat_1_v5_gn_5_9980 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 20303346-20303845 Lactuca sativa
Lsat_1_v5_gn_5_9980 1.0kb upstream 1.0kb upstream 5400   true Lsat_1_v8_lg_5: 20297946-20303345 Lactuca sativa
Lsat_1_v5_gn_5_9980 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 20297946-20298945 Lactuca sativa
Lsat_1_v5_gn_5_9980 1.0kb downstream 1.0kb downstream 5400   true Lsat_1_v8_lg_5: 20298946-20304345 Lactuca sativa
Lsat_1_v5_gn_5_9980 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 20303346-20304345 Lactuca sativa
Lsat_1_v5_gn_5_9980 2.0kb upstream 2.0kb upstream 6400   true Lsat_1_v8_lg_5: 20296946-20303345 Lactuca sativa
Lsat_1_v5_gn_5_9980 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 20296946-20298945 Lactuca sativa
Lsat_1_v5_gn_5_9980 2.0kb downstream 2.0kb downstream 6400   true Lsat_1_v8_lg_5: 20298946-20305345 Lactuca sativa
Lsat_1_v5_gn_5_9980 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 20303346-20305345 Lactuca sativa
Lsat_1_v5_gn_5_9980 5.0kb upstream 5.0kb upstream 9400   true Lsat_1_v8_lg_5: 20293946-20303345 Lactuca sativa
Lsat_1_v5_gn_5_9980 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 20293946-20298945 Lactuca sativa
Lsat_1_v5_gn_5_9980 5.0kb downstream 5.0kb downstream 9400   true Lsat_1_v8_lg_5: 20298946-20308345 Lactuca sativa
Lsat_1_v5_gn_5_9980 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 20303346-20308345 Lactuca sativa
Lsat_1_v5_gn_5_9980 10.0kb upstream 10.0kb upstream 14400   true Lsat_1_v8_lg_5: 20288946-20303345 Lactuca sativa
Lsat_1_v5_gn_5_9980 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 20288946-20298945 Lactuca sativa
Lsat_1_v5_gn_5_9980 10.0kb downstream 10.0kb downstream 14400   true Lsat_1_v8_lg_5: 20298946-20313345 Lactuca sativa
Lsat_1_v5_gn_5_9980 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 20303346-20313345 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469889 5263 Asterids View MSA
123738265 5271 Pentapetalae View MSA
122792462 5272 Eudicot View MSA
122051461 5273 Angiosperm View MSA
121348224 5274 Embryophyte View MSA
123380779 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain