Gene : Lsat_1_v5_gn_0_41560 L. sativa V8
Defline:  (1 of 1) PF00181//PF00203//PF03947 - Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2) // Ribosomal protein S19 (Ribosomal_S19) // Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C) Genomic Order:  1818
Name:  ? Lsat_1_v5_gn_0_41560 Secondary Identifier:  ? PAC:38940869
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_0_41560 0.5kb upstream 0.5kb upstream 2430   true Lsat_1_v8_lg_6: 88154358-88156787 Lactuca sativa
Lsat_1_v5_gn_0_41560 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 88156288-88156787 Lactuca sativa
Lsat_1_v5_gn_0_41560 0.5kb downstream 0.5kb downstream 2430   true Lsat_1_v8_lg_6: 88153858-88156287 Lactuca sativa
Lsat_1_v5_gn_0_41560 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 88153858-88154357 Lactuca sativa
Lsat_1_v5_gn_0_41560 1.0kb upstream 1.0kb upstream 2930   true Lsat_1_v8_lg_6: 88154358-88157287 Lactuca sativa
Lsat_1_v5_gn_0_41560 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 88156288-88157287 Lactuca sativa
Lsat_1_v5_gn_0_41560 1.0kb downstream 1.0kb downstream 2930   true Lsat_1_v8_lg_6: 88153358-88156287 Lactuca sativa
Lsat_1_v5_gn_0_41560 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 88153358-88154357 Lactuca sativa
Lsat_1_v5_gn_0_41560 2.0kb upstream 2.0kb upstream 3930   true Lsat_1_v8_lg_6: 88154358-88158287 Lactuca sativa
Lsat_1_v5_gn_0_41560 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 88156288-88158287 Lactuca sativa
Lsat_1_v5_gn_0_41560 2.0kb downstream 2.0kb downstream 3930   true Lsat_1_v8_lg_6: 88152358-88156287 Lactuca sativa
Lsat_1_v5_gn_0_41560 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 88152358-88154357 Lactuca sativa
Lsat_1_v5_gn_0_41560 5.0kb upstream 5.0kb upstream 6930   true Lsat_1_v8_lg_6: 88154358-88161287 Lactuca sativa
Lsat_1_v5_gn_0_41560 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 88156288-88161287 Lactuca sativa
Lsat_1_v5_gn_0_41560 5.0kb downstream 5.0kb downstream 6930   true Lsat_1_v8_lg_6: 88149358-88156287 Lactuca sativa
Lsat_1_v5_gn_0_41560 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 88149358-88154357 Lactuca sativa
Lsat_1_v5_gn_0_41560 10.0kb upstream 10.0kb upstream 11930   true Lsat_1_v8_lg_6: 88154358-88166287 Lactuca sativa
Lsat_1_v5_gn_0_41560 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 88156288-88166287 Lactuca sativa
Lsat_1_v5_gn_0_41560 10.0kb downstream 10.0kb downstream 11930   true Lsat_1_v8_lg_6: 88144358-88156287 Lactuca sativa
Lsat_1_v5_gn_0_41560 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 88144358-88154357 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481644 5263 Asterids View MSA
123748926 5271 Pentapetalae View MSA
122797824 5272 Eudicot View MSA
122049375 5273 Angiosperm View MSA
123428909 5275 Viridiplantae View MSA
121350673 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain