Gene : Lsat_1_v5_gn_9_27081 L. sativa V8
Defline:  (1 of 2) K08910 - light-harvesting complex I chlorophyll a/b binding protein 4 (LHCA4) Genomic Order:  553
Name:  ? Lsat_1_v5_gn_9_27081 Secondary Identifier:  ? PAC:38969675
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_27081 0.5kb upstream 0.5kb upstream 2004   true Lsat_1_v8_lg_5: 41255071-41257074 Lactuca sativa
Lsat_1_v5_gn_9_27081 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 41255071-41255570 Lactuca sativa
Lsat_1_v5_gn_9_27081 0.5kb downstream 0.5kb downstream 2004   true Lsat_1_v8_lg_5: 41255571-41257574 Lactuca sativa
Lsat_1_v5_gn_9_27081 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 41257075-41257574 Lactuca sativa
Lsat_1_v5_gn_9_27081 1.0kb upstream 1.0kb upstream 2504   true Lsat_1_v8_lg_5: 41254571-41257074 Lactuca sativa
Lsat_1_v5_gn_9_27081 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 41254571-41255570 Lactuca sativa
Lsat_1_v5_gn_9_27081 1.0kb downstream 1.0kb downstream 2504   true Lsat_1_v8_lg_5: 41255571-41258074 Lactuca sativa
Lsat_1_v5_gn_9_27081 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 41257075-41258074 Lactuca sativa
Lsat_1_v5_gn_9_27081 2.0kb upstream 2.0kb upstream 3504   true Lsat_1_v8_lg_5: 41253571-41257074 Lactuca sativa
Lsat_1_v5_gn_9_27081 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 41253571-41255570 Lactuca sativa
Lsat_1_v5_gn_9_27081 2.0kb downstream 2.0kb downstream 3504   true Lsat_1_v8_lg_5: 41255571-41259074 Lactuca sativa
Lsat_1_v5_gn_9_27081 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 41257075-41259074 Lactuca sativa
Lsat_1_v5_gn_9_27081 5.0kb upstream 5.0kb upstream 6504   true Lsat_1_v8_lg_5: 41250571-41257074 Lactuca sativa
Lsat_1_v5_gn_9_27081 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 41250571-41255570 Lactuca sativa
Lsat_1_v5_gn_9_27081 5.0kb downstream 5.0kb downstream 6504   true Lsat_1_v8_lg_5: 41255571-41262074 Lactuca sativa
Lsat_1_v5_gn_9_27081 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 41257075-41262074 Lactuca sativa
Lsat_1_v5_gn_9_27081 10.0kb upstream 10.0kb upstream 11504   true Lsat_1_v8_lg_5: 41245571-41257074 Lactuca sativa
Lsat_1_v5_gn_9_27081 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 41245571-41255570 Lactuca sativa
Lsat_1_v5_gn_9_27081 10.0kb downstream 10.0kb downstream 11504   true Lsat_1_v8_lg_5: 41255571-41267074 Lactuca sativa
Lsat_1_v5_gn_9_27081 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 41257075-41267074 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470538 5263 Asterids View MSA
123738583 5271 Pentapetalae View MSA
122789063 5272 Eudicot View MSA
122041547 5273 Angiosperm View MSA
121346524 5274 Embryophyte View MSA
123425939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain