Gene : Lsat_1_v5_gn_6_100640 L. sativa V8
Defline:  (1 of 2) 2.4.1.12//2.4.1.29 - Cellulose synthase (UDP-forming) / UDP-glucose-cellulose glucosyltransferase // Cellulose synthase (GDP-forming) / GDP-glucose-cellulose glucosyltransferase Genomic Order:  2925
Name:  ? Lsat_1_v5_gn_6_100640 Secondary Identifier:  ? PAC:38937275
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-1001 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_100640 0.5kb upstream 0.5kb upstream 7321   true Lsat_1_v8_lg_6: 165338067-165345387 Lactuca sativa
Lsat_1_v5_gn_6_100640 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 165344888-165345387 Lactuca sativa
Lsat_1_v5_gn_6_100640 0.5kb downstream 0.5kb downstream 7321   true Lsat_1_v8_lg_6: 165337567-165344887 Lactuca sativa
Lsat_1_v5_gn_6_100640 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 165337567-165338066 Lactuca sativa
Lsat_1_v5_gn_6_100640 1.0kb upstream 1.0kb upstream 7821   true Lsat_1_v8_lg_6: 165338067-165345887 Lactuca sativa
Lsat_1_v5_gn_6_100640 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 165344888-165345887 Lactuca sativa
Lsat_1_v5_gn_6_100640 1.0kb downstream 1.0kb downstream 7821   true Lsat_1_v8_lg_6: 165337067-165344887 Lactuca sativa
Lsat_1_v5_gn_6_100640 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 165337067-165338066 Lactuca sativa
Lsat_1_v5_gn_6_100640 2.0kb upstream 2.0kb upstream 8821   true Lsat_1_v8_lg_6: 165338067-165346887 Lactuca sativa
Lsat_1_v5_gn_6_100640 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 165344888-165346887 Lactuca sativa
Lsat_1_v5_gn_6_100640 2.0kb downstream 2.0kb downstream 8821   true Lsat_1_v8_lg_6: 165336067-165344887 Lactuca sativa
Lsat_1_v5_gn_6_100640 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 165336067-165338066 Lactuca sativa
Lsat_1_v5_gn_6_100640 5.0kb upstream 5.0kb upstream 11821   true Lsat_1_v8_lg_6: 165338067-165349887 Lactuca sativa
Lsat_1_v5_gn_6_100640 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 165344888-165349887 Lactuca sativa
Lsat_1_v5_gn_6_100640 5.0kb downstream 5.0kb downstream 11821   true Lsat_1_v8_lg_6: 165333067-165344887 Lactuca sativa
Lsat_1_v5_gn_6_100640 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 165333067-165338066 Lactuca sativa
Lsat_1_v5_gn_6_100640 10.0kb upstream 10.0kb upstream 16821   true Lsat_1_v8_lg_6: 165338067-165354887 Lactuca sativa
Lsat_1_v5_gn_6_100640 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 165344888-165354887 Lactuca sativa
Lsat_1_v5_gn_6_100640 10.0kb downstream 10.0kb downstream 16821   true Lsat_1_v8_lg_6: 165328067-165344887 Lactuca sativa
Lsat_1_v5_gn_6_100640 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 165328067-165338066 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474349 5263 Asterids View MSA
123747849 5271 Pentapetalae View MSA
122795199 5272 Eudicot View MSA
122048668 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain