Gene : Lsat_1_v5_gn_6_102120 L. sativa V8
Defline:  (1 of 1) K03650 - tRNA modification GTPase [EC:3.6.-.-] (mnmE, trmE, MSS1) Genomic Order:  2969
Name:  ? Lsat_1_v5_gn_6_102120 Secondary Identifier:  ? PAC:38937784
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_102120 0.5kb upstream 0.5kb upstream 4338   true Lsat_1_v8_lg_6: 167182904-167187241 Lactuca sativa
Lsat_1_v5_gn_6_102120 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 167182904-167183403 Lactuca sativa
Lsat_1_v5_gn_6_102120 0.5kb downstream 0.5kb downstream 4338   true Lsat_1_v8_lg_6: 167183404-167187741 Lactuca sativa
Lsat_1_v5_gn_6_102120 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 167187242-167187741 Lactuca sativa
Lsat_1_v5_gn_6_102120 1.0kb upstream 1.0kb upstream 4838   true Lsat_1_v8_lg_6: 167182404-167187241 Lactuca sativa
Lsat_1_v5_gn_6_102120 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 167182404-167183403 Lactuca sativa
Lsat_1_v5_gn_6_102120 1.0kb downstream 1.0kb downstream 4838   true Lsat_1_v8_lg_6: 167183404-167188241 Lactuca sativa
Lsat_1_v5_gn_6_102120 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 167187242-167188241 Lactuca sativa
Lsat_1_v5_gn_6_102120 2.0kb upstream 2.0kb upstream 5838   true Lsat_1_v8_lg_6: 167181404-167187241 Lactuca sativa
Lsat_1_v5_gn_6_102120 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 167181404-167183403 Lactuca sativa
Lsat_1_v5_gn_6_102120 2.0kb downstream 2.0kb downstream 5838   true Lsat_1_v8_lg_6: 167183404-167189241 Lactuca sativa
Lsat_1_v5_gn_6_102120 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 167187242-167189241 Lactuca sativa
Lsat_1_v5_gn_6_102120 5.0kb upstream 5.0kb upstream 8838   true Lsat_1_v8_lg_6: 167178404-167187241 Lactuca sativa
Lsat_1_v5_gn_6_102120 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 167178404-167183403 Lactuca sativa
Lsat_1_v5_gn_6_102120 5.0kb downstream 5.0kb downstream 8838   true Lsat_1_v8_lg_6: 167183404-167192241 Lactuca sativa
Lsat_1_v5_gn_6_102120 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 167187242-167192241 Lactuca sativa
Lsat_1_v5_gn_6_102120 10.0kb upstream 10.0kb upstream 13838   true Lsat_1_v8_lg_6: 167173404-167187241 Lactuca sativa
Lsat_1_v5_gn_6_102120 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 167173404-167183403 Lactuca sativa
Lsat_1_v5_gn_6_102120 10.0kb downstream 10.0kb downstream 13838   true Lsat_1_v8_lg_6: 167183404-167197241 Lactuca sativa
Lsat_1_v5_gn_6_102120 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 167187242-167197241 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121446387 5263 Asterids Singleton cluster - no MSA
123752683 5271 Pentapetalae View MSA
122774725 5272 Eudicot View MSA
122045813 5273 Angiosperm View MSA
121347341 5274 Embryophyte View MSA
123428429 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain