Gene : Lsat_1_v5_gn_6_102081 L. sativa V8
Defline:  (1 of 9) PTHR13169 - UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN Genomic Order:  2967
Name:  ? Lsat_1_v5_gn_6_102081 Secondary Identifier:  ? PAC:38938357
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_102081 0.5kb upstream 0.5kb upstream 2489   true Lsat_1_v8_lg_6: 167146679-167149167 Lactuca sativa
Lsat_1_v5_gn_6_102081 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 167148668-167149167 Lactuca sativa
Lsat_1_v5_gn_6_102081 0.5kb downstream 0.5kb downstream 2489   true Lsat_1_v8_lg_6: 167146179-167148667 Lactuca sativa
Lsat_1_v5_gn_6_102081 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 167146179-167146678 Lactuca sativa
Lsat_1_v5_gn_6_102081 1.0kb upstream 1.0kb upstream 2989   true Lsat_1_v8_lg_6: 167146679-167149667 Lactuca sativa
Lsat_1_v5_gn_6_102081 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 167148668-167149667 Lactuca sativa
Lsat_1_v5_gn_6_102081 1.0kb downstream 1.0kb downstream 2989   true Lsat_1_v8_lg_6: 167145679-167148667 Lactuca sativa
Lsat_1_v5_gn_6_102081 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 167145679-167146678 Lactuca sativa
Lsat_1_v5_gn_6_102081 2.0kb upstream 2.0kb upstream 3989   true Lsat_1_v8_lg_6: 167146679-167150667 Lactuca sativa
Lsat_1_v5_gn_6_102081 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 167148668-167150667 Lactuca sativa
Lsat_1_v5_gn_6_102081 2.0kb downstream 2.0kb downstream 3989   true Lsat_1_v8_lg_6: 167144679-167148667 Lactuca sativa
Lsat_1_v5_gn_6_102081 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 167144679-167146678 Lactuca sativa
Lsat_1_v5_gn_6_102081 5.0kb upstream 5.0kb upstream 6989   true Lsat_1_v8_lg_6: 167146679-167153667 Lactuca sativa
Lsat_1_v5_gn_6_102081 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 167148668-167153667 Lactuca sativa
Lsat_1_v5_gn_6_102081 5.0kb downstream 5.0kb downstream 6989   true Lsat_1_v8_lg_6: 167141679-167148667 Lactuca sativa
Lsat_1_v5_gn_6_102081 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 167141679-167146678 Lactuca sativa
Lsat_1_v5_gn_6_102081 10.0kb upstream 10.0kb upstream 11989   true Lsat_1_v8_lg_6: 167146679-167158667 Lactuca sativa
Lsat_1_v5_gn_6_102081 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 167148668-167158667 Lactuca sativa
Lsat_1_v5_gn_6_102081 10.0kb downstream 10.0kb downstream 11989   true Lsat_1_v8_lg_6: 167136679-167148667 Lactuca sativa
Lsat_1_v5_gn_6_102081 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 167136679-167146678 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481736 5263 Asterids View MSA
123744059 5271 Pentapetalae View MSA
122795764 5272 Eudicot View MSA
122050739 5273 Angiosperm View MSA
121344338 5274 Embryophyte View MSA
123427741 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain