Gene : Lsat_1_v5_gn_6_102281 L. sativa V8
Defline:  (1 of 2) PTHR10887//PTHR10887:SF359 - DNA2/NAM7 HELICASE FAMILY // HELICASE SEN1 Genomic Order:  2975
Name:  ? Lsat_1_v5_gn_6_102281 Secondary Identifier:  ? PAC:38941255
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_102281 0.5kb upstream 0.5kb upstream 6373   true Lsat_1_v8_lg_6: 167286547-167292919 Lactuca sativa
Lsat_1_v5_gn_6_102281 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 167292420-167292919 Lactuca sativa
Lsat_1_v5_gn_6_102281 0.5kb downstream 0.5kb downstream 6373   true Lsat_1_v8_lg_6: 167286047-167292419 Lactuca sativa
Lsat_1_v5_gn_6_102281 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 167286047-167286546 Lactuca sativa
Lsat_1_v5_gn_6_102281 1.0kb upstream 1.0kb upstream 6873   true Lsat_1_v8_lg_6: 167286547-167293419 Lactuca sativa
Lsat_1_v5_gn_6_102281 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 167292420-167293419 Lactuca sativa
Lsat_1_v5_gn_6_102281 1.0kb downstream 1.0kb downstream 6873   true Lsat_1_v8_lg_6: 167285547-167292419 Lactuca sativa
Lsat_1_v5_gn_6_102281 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 167285547-167286546 Lactuca sativa
Lsat_1_v5_gn_6_102281 2.0kb upstream 2.0kb upstream 7873   true Lsat_1_v8_lg_6: 167286547-167294419 Lactuca sativa
Lsat_1_v5_gn_6_102281 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 167292420-167294419 Lactuca sativa
Lsat_1_v5_gn_6_102281 2.0kb downstream 2.0kb downstream 7873   true Lsat_1_v8_lg_6: 167284547-167292419 Lactuca sativa
Lsat_1_v5_gn_6_102281 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 167284547-167286546 Lactuca sativa
Lsat_1_v5_gn_6_102281 5.0kb upstream 5.0kb upstream 10873   true Lsat_1_v8_lg_6: 167286547-167297419 Lactuca sativa
Lsat_1_v5_gn_6_102281 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 167292420-167297419 Lactuca sativa
Lsat_1_v5_gn_6_102281 5.0kb downstream 5.0kb downstream 10873   true Lsat_1_v8_lg_6: 167281547-167292419 Lactuca sativa
Lsat_1_v5_gn_6_102281 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 167281547-167286546 Lactuca sativa
Lsat_1_v5_gn_6_102281 10.0kb upstream 10.0kb upstream 15873   true Lsat_1_v8_lg_6: 167286547-167302419 Lactuca sativa
Lsat_1_v5_gn_6_102281 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 167292420-167302419 Lactuca sativa
Lsat_1_v5_gn_6_102281 10.0kb downstream 10.0kb downstream 15873   true Lsat_1_v8_lg_6: 167276547-167292419 Lactuca sativa
Lsat_1_v5_gn_6_102281 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 167276547-167286546 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478801 5263 Asterids View MSA
123751960 5271 Pentapetalae View MSA
122793579 5272 Eudicot View MSA
122046375 5273 Angiosperm View MSA
123429092 5275 Viridiplantae View MSA
121350941 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain