Gene : Lsat_1_v5_gn_6_103900 L. sativa V8
Defline:  (1 of 1) PTHR10788:SF25 - TREHALOSE-PHOSPHATE PHOSPHATASE D-RELATED Genomic Order:  2978
Name:  ? Lsat_1_v5_gn_6_103900 Secondary Identifier:  ? PAC:38941103
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_103900 0.5kb upstream 0.5kb upstream 3191   true Lsat_1_v8_lg_6: 167808133-167811323 Lactuca sativa
Lsat_1_v5_gn_6_103900 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 167808133-167808632 Lactuca sativa
Lsat_1_v5_gn_6_103900 0.5kb downstream 0.5kb downstream 3191   true Lsat_1_v8_lg_6: 167808633-167811823 Lactuca sativa
Lsat_1_v5_gn_6_103900 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 167811324-167811823 Lactuca sativa
Lsat_1_v5_gn_6_103900 1.0kb upstream 1.0kb upstream 3691   true Lsat_1_v8_lg_6: 167807633-167811323 Lactuca sativa
Lsat_1_v5_gn_6_103900 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 167807633-167808632 Lactuca sativa
Lsat_1_v5_gn_6_103900 1.0kb downstream 1.0kb downstream 3691   true Lsat_1_v8_lg_6: 167808633-167812323 Lactuca sativa
Lsat_1_v5_gn_6_103900 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 167811324-167812323 Lactuca sativa
Lsat_1_v5_gn_6_103900 2.0kb upstream 2.0kb upstream 4691   true Lsat_1_v8_lg_6: 167806633-167811323 Lactuca sativa
Lsat_1_v5_gn_6_103900 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 167806633-167808632 Lactuca sativa
Lsat_1_v5_gn_6_103900 2.0kb downstream 2.0kb downstream 4691   true Lsat_1_v8_lg_6: 167808633-167813323 Lactuca sativa
Lsat_1_v5_gn_6_103900 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 167811324-167813323 Lactuca sativa
Lsat_1_v5_gn_6_103900 5.0kb upstream 5.0kb upstream 7691   true Lsat_1_v8_lg_6: 167803633-167811323 Lactuca sativa
Lsat_1_v5_gn_6_103900 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 167803633-167808632 Lactuca sativa
Lsat_1_v5_gn_6_103900 5.0kb downstream 5.0kb downstream 7691   true Lsat_1_v8_lg_6: 167808633-167816323 Lactuca sativa
Lsat_1_v5_gn_6_103900 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 167811324-167816323 Lactuca sativa
Lsat_1_v5_gn_6_103900 10.0kb upstream 10.0kb upstream 12691   true Lsat_1_v8_lg_6: 167798633-167811323 Lactuca sativa
Lsat_1_v5_gn_6_103900 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 167798633-167808632 Lactuca sativa
Lsat_1_v5_gn_6_103900 10.0kb downstream 10.0kb downstream 12691   true Lsat_1_v8_lg_6: 167808633-167821323 Lactuca sativa
Lsat_1_v5_gn_6_103900 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 167811324-167821323 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477134 5263 Asterids View MSA
123746966 5271 Pentapetalae View MSA
122786046 5272 Eudicot View MSA
122042129 5273 Angiosperm View MSA
121351669 5274 Embryophyte View MSA
123427869 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain