Gene : Lsat_1_v5_gn_6_102941 L. sativa V8
Defline:  (1 of 1) K03125 - transcription initiation factor TFIID subunit 1 (TAF1) Genomic Order:  2994
Name:  ? Lsat_1_v5_gn_6_102941 Secondary Identifier:  ? PAC:38939506
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_102941 0.5kb upstream 0.5kb upstream 14171   true Lsat_1_v8_lg_6: 170418207-170432377 Lactuca sativa
Lsat_1_v5_gn_6_102941 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 170431878-170432377 Lactuca sativa
Lsat_1_v5_gn_6_102941 0.5kb downstream 0.5kb downstream 14171   true Lsat_1_v8_lg_6: 170417707-170431877 Lactuca sativa
Lsat_1_v5_gn_6_102941 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 170417707-170418206 Lactuca sativa
Lsat_1_v5_gn_6_102941 1.0kb upstream 1.0kb upstream 14671   true Lsat_1_v8_lg_6: 170418207-170432877 Lactuca sativa
Lsat_1_v5_gn_6_102941 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 170431878-170432877 Lactuca sativa
Lsat_1_v5_gn_6_102941 1.0kb downstream 1.0kb downstream 14671   true Lsat_1_v8_lg_6: 170417207-170431877 Lactuca sativa
Lsat_1_v5_gn_6_102941 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 170417207-170418206 Lactuca sativa
Lsat_1_v5_gn_6_102941 2.0kb upstream 2.0kb upstream 15671   true Lsat_1_v8_lg_6: 170418207-170433877 Lactuca sativa
Lsat_1_v5_gn_6_102941 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 170431878-170433877 Lactuca sativa
Lsat_1_v5_gn_6_102941 2.0kb downstream 2.0kb downstream 15671   true Lsat_1_v8_lg_6: 170416207-170431877 Lactuca sativa
Lsat_1_v5_gn_6_102941 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 170416207-170418206 Lactuca sativa
Lsat_1_v5_gn_6_102941 5.0kb upstream 5.0kb upstream 18671   true Lsat_1_v8_lg_6: 170418207-170436877 Lactuca sativa
Lsat_1_v5_gn_6_102941 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 170431878-170436877 Lactuca sativa
Lsat_1_v5_gn_6_102941 5.0kb downstream 5.0kb downstream 18671   true Lsat_1_v8_lg_6: 170413207-170431877 Lactuca sativa
Lsat_1_v5_gn_6_102941 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 170413207-170418206 Lactuca sativa
Lsat_1_v5_gn_6_102941 10.0kb upstream 10.0kb upstream 23671   true Lsat_1_v8_lg_6: 170418207-170441877 Lactuca sativa
Lsat_1_v5_gn_6_102941 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 170431878-170441877 Lactuca sativa
Lsat_1_v5_gn_6_102941 10.0kb downstream 10.0kb downstream 23671   true Lsat_1_v8_lg_6: 170408207-170431877 Lactuca sativa
Lsat_1_v5_gn_6_102941 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 170408207-170418206 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480573 5263 Asterids View MSA
123748970 5271 Pentapetalae View MSA
122794337 5272 Eudicot View MSA
122046359 5273 Angiosperm View MSA
121347140 5274 Embryophyte View MSA
123423919 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain