Gene : Lsat_1_v5_gn_6_106621 L. sativa V8
Defline:  (1 of 2) PTHR20902//PTHR20902:SF0 - 41-2 PROTEIN ANTIGEN-RELATED // TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 5 Genomic Order:  3098
Name:  ? Lsat_1_v5_gn_6_106621 Secondary Identifier:  ? PAC:38941181
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_106621 0.5kb upstream 0.5kb upstream 2583   true Lsat_1_v8_lg_6: 176958913-176961495 Lactuca sativa
Lsat_1_v5_gn_6_106621 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 176958913-176959412 Lactuca sativa
Lsat_1_v5_gn_6_106621 0.5kb downstream 0.5kb downstream 2583   true Lsat_1_v8_lg_6: 176959413-176961995 Lactuca sativa
Lsat_1_v5_gn_6_106621 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 176961496-176961995 Lactuca sativa
Lsat_1_v5_gn_6_106621 1.0kb upstream 1.0kb upstream 3083   true Lsat_1_v8_lg_6: 176958413-176961495 Lactuca sativa
Lsat_1_v5_gn_6_106621 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 176958413-176959412 Lactuca sativa
Lsat_1_v5_gn_6_106621 1.0kb downstream 1.0kb downstream 3083   true Lsat_1_v8_lg_6: 176959413-176962495 Lactuca sativa
Lsat_1_v5_gn_6_106621 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 176961496-176962495 Lactuca sativa
Lsat_1_v5_gn_6_106621 2.0kb upstream 2.0kb upstream 4083   true Lsat_1_v8_lg_6: 176957413-176961495 Lactuca sativa
Lsat_1_v5_gn_6_106621 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 176957413-176959412 Lactuca sativa
Lsat_1_v5_gn_6_106621 2.0kb downstream 2.0kb downstream 4083   true Lsat_1_v8_lg_6: 176959413-176963495 Lactuca sativa
Lsat_1_v5_gn_6_106621 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 176961496-176963495 Lactuca sativa
Lsat_1_v5_gn_6_106621 5.0kb upstream 5.0kb upstream 7083   true Lsat_1_v8_lg_6: 176954413-176961495 Lactuca sativa
Lsat_1_v5_gn_6_106621 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 176954413-176959412 Lactuca sativa
Lsat_1_v5_gn_6_106621 5.0kb downstream 5.0kb downstream 7083   true Lsat_1_v8_lg_6: 176959413-176966495 Lactuca sativa
Lsat_1_v5_gn_6_106621 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 176961496-176966495 Lactuca sativa
Lsat_1_v5_gn_6_106621 10.0kb upstream 10.0kb upstream 12083   true Lsat_1_v8_lg_6: 176949413-176961495 Lactuca sativa
Lsat_1_v5_gn_6_106621 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 176949413-176959412 Lactuca sativa
Lsat_1_v5_gn_6_106621 10.0kb downstream 10.0kb downstream 12083   true Lsat_1_v8_lg_6: 176959413-176971495 Lactuca sativa
Lsat_1_v5_gn_6_106621 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 176961496-176971495 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475873 5263 Asterids View MSA
123745459 5271 Pentapetalae View MSA
122785825 5272 Eudicot View MSA
122045467 5273 Angiosperm View MSA
121344565 5274 Embryophyte View MSA
123425941 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain