Gene : Lsat_1_v5_gn_6_107880 L. sativa V8
Defline:  (1 of 6) PTHR22952//PTHR22952:SF145 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED // SUBFAMILY NOT NAMED Genomic Order:  3104
Name:  ? Lsat_1_v5_gn_6_107880 Secondary Identifier:  ? PAC:38940558
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_107880 0.5kb upstream 0.5kb upstream 1590   true Lsat_1_v8_lg_6: 177375908-177377497 Lactuca sativa
Lsat_1_v5_gn_6_107880 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 177375908-177376407 Lactuca sativa
Lsat_1_v5_gn_6_107880 0.5kb downstream 0.5kb downstream 1590   true Lsat_1_v8_lg_6: 177376408-177377997 Lactuca sativa
Lsat_1_v5_gn_6_107880 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 177377498-177377997 Lactuca sativa
Lsat_1_v5_gn_6_107880 1.0kb upstream 1.0kb upstream 2090   true Lsat_1_v8_lg_6: 177375408-177377497 Lactuca sativa
Lsat_1_v5_gn_6_107880 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 177375408-177376407 Lactuca sativa
Lsat_1_v5_gn_6_107880 1.0kb downstream 1.0kb downstream 2090   true Lsat_1_v8_lg_6: 177376408-177378497 Lactuca sativa
Lsat_1_v5_gn_6_107880 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 177377498-177378497 Lactuca sativa
Lsat_1_v5_gn_6_107880 2.0kb upstream 2.0kb upstream 3090   true Lsat_1_v8_lg_6: 177374408-177377497 Lactuca sativa
Lsat_1_v5_gn_6_107880 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 177374408-177376407 Lactuca sativa
Lsat_1_v5_gn_6_107880 2.0kb downstream 2.0kb downstream 3090   true Lsat_1_v8_lg_6: 177376408-177379497 Lactuca sativa
Lsat_1_v5_gn_6_107880 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 177377498-177379497 Lactuca sativa
Lsat_1_v5_gn_6_107880 5.0kb upstream 5.0kb upstream 6090   true Lsat_1_v8_lg_6: 177371408-177377497 Lactuca sativa
Lsat_1_v5_gn_6_107880 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 177371408-177376407 Lactuca sativa
Lsat_1_v5_gn_6_107880 5.0kb downstream 5.0kb downstream 6090   true Lsat_1_v8_lg_6: 177376408-177382497 Lactuca sativa
Lsat_1_v5_gn_6_107880 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 177377498-177382497 Lactuca sativa
Lsat_1_v5_gn_6_107880 10.0kb upstream 10.0kb upstream 11090   true Lsat_1_v8_lg_6: 177366408-177377497 Lactuca sativa
Lsat_1_v5_gn_6_107880 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 177366408-177376407 Lactuca sativa
Lsat_1_v5_gn_6_107880 10.0kb downstream 10.0kb downstream 11090   true Lsat_1_v8_lg_6: 177376408-177387497 Lactuca sativa
Lsat_1_v5_gn_6_107880 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 177377498-177387497 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478860 5263 Asterids View MSA
123742632 5271 Pentapetalae View MSA
122797176 5272 Eudicot View MSA
122044806 5273 Angiosperm View MSA
121350176 5274 Embryophyte View MSA
123381607 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain