Gene : Lsat_1_v5_gn_6_109101 L. sativa V8
Defline:  (1 of 200) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  3133
Name:  ? Lsat_1_v5_gn_6_109101 Secondary Identifier:  ? PAC:38936591
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_109101 0.5kb upstream 0.5kb upstream 2175   true Lsat_1_v8_lg_6: 179421563-179423737 Lactuca sativa
Lsat_1_v5_gn_6_109101 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 179421563-179422062 Lactuca sativa
Lsat_1_v5_gn_6_109101 0.5kb downstream 0.5kb downstream 2175   true Lsat_1_v8_lg_6: 179422063-179424237 Lactuca sativa
Lsat_1_v5_gn_6_109101 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 179423738-179424237 Lactuca sativa
Lsat_1_v5_gn_6_109101 1.0kb upstream 1.0kb upstream 2675   true Lsat_1_v8_lg_6: 179421063-179423737 Lactuca sativa
Lsat_1_v5_gn_6_109101 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 179421063-179422062 Lactuca sativa
Lsat_1_v5_gn_6_109101 1.0kb downstream 1.0kb downstream 2675   true Lsat_1_v8_lg_6: 179422063-179424737 Lactuca sativa
Lsat_1_v5_gn_6_109101 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 179423738-179424737 Lactuca sativa
Lsat_1_v5_gn_6_109101 2.0kb upstream 2.0kb upstream 3675   true Lsat_1_v8_lg_6: 179420063-179423737 Lactuca sativa
Lsat_1_v5_gn_6_109101 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 179420063-179422062 Lactuca sativa
Lsat_1_v5_gn_6_109101 2.0kb downstream 2.0kb downstream 3675   true Lsat_1_v8_lg_6: 179422063-179425737 Lactuca sativa
Lsat_1_v5_gn_6_109101 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 179423738-179425737 Lactuca sativa
Lsat_1_v5_gn_6_109101 5.0kb upstream 5.0kb upstream 6675   true Lsat_1_v8_lg_6: 179417063-179423737 Lactuca sativa
Lsat_1_v5_gn_6_109101 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 179417063-179422062 Lactuca sativa
Lsat_1_v5_gn_6_109101 5.0kb downstream 5.0kb downstream 6675   true Lsat_1_v8_lg_6: 179422063-179428737 Lactuca sativa
Lsat_1_v5_gn_6_109101 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 179423738-179428737 Lactuca sativa
Lsat_1_v5_gn_6_109101 10.0kb upstream 10.0kb upstream 11675   true Lsat_1_v8_lg_6: 179412063-179423737 Lactuca sativa
Lsat_1_v5_gn_6_109101 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 179412063-179422062 Lactuca sativa
Lsat_1_v5_gn_6_109101 10.0kb downstream 10.0kb downstream 11675   true Lsat_1_v8_lg_6: 179422063-179433737 Lactuca sativa
Lsat_1_v5_gn_6_109101 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 179423738-179433737 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471604 5263 Asterids View MSA
123739132 5271 Pentapetalae View MSA
122788969 5272 Eudicot View MSA
122045173 5273 Angiosperm View MSA
121310410 5274 Embryophyte View MSA
123347900 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain