Gene : Lsat_1_v5_gn_6_109860 L. sativa V8
Defline:  (1 of 1) PTHR14190:SF7 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 52 HOMOLOG Genomic Order:  3183
Name:  ? Lsat_1_v5_gn_6_109860 Secondary Identifier:  ? PAC:38940688
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_109860 0.5kb upstream 0.5kb upstream 5749   true Lsat_1_v8_lg_6: 181574329-181580077 Lactuca sativa
Lsat_1_v5_gn_6_109860 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 181574329-181574828 Lactuca sativa
Lsat_1_v5_gn_6_109860 0.5kb downstream 0.5kb downstream 5749   true Lsat_1_v8_lg_6: 181574829-181580577 Lactuca sativa
Lsat_1_v5_gn_6_109860 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 181580078-181580577 Lactuca sativa
Lsat_1_v5_gn_6_109860 1.0kb upstream 1.0kb upstream 6249   true Lsat_1_v8_lg_6: 181573829-181580077 Lactuca sativa
Lsat_1_v5_gn_6_109860 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 181573829-181574828 Lactuca sativa
Lsat_1_v5_gn_6_109860 1.0kb downstream 1.0kb downstream 6249   true Lsat_1_v8_lg_6: 181574829-181581077 Lactuca sativa
Lsat_1_v5_gn_6_109860 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 181580078-181581077 Lactuca sativa
Lsat_1_v5_gn_6_109860 2.0kb upstream 2.0kb upstream 7249   true Lsat_1_v8_lg_6: 181572829-181580077 Lactuca sativa
Lsat_1_v5_gn_6_109860 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 181572829-181574828 Lactuca sativa
Lsat_1_v5_gn_6_109860 2.0kb downstream 2.0kb downstream 7249   true Lsat_1_v8_lg_6: 181574829-181582077 Lactuca sativa
Lsat_1_v5_gn_6_109860 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 181580078-181582077 Lactuca sativa
Lsat_1_v5_gn_6_109860 5.0kb upstream 5.0kb upstream 10249   true Lsat_1_v8_lg_6: 181569829-181580077 Lactuca sativa
Lsat_1_v5_gn_6_109860 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 181569829-181574828 Lactuca sativa
Lsat_1_v5_gn_6_109860 5.0kb downstream 5.0kb downstream 10249   true Lsat_1_v8_lg_6: 181574829-181585077 Lactuca sativa
Lsat_1_v5_gn_6_109860 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 181580078-181585077 Lactuca sativa
Lsat_1_v5_gn_6_109860 10.0kb upstream 10.0kb upstream 15249   true Lsat_1_v8_lg_6: 181564829-181580077 Lactuca sativa
Lsat_1_v5_gn_6_109860 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 181564829-181574828 Lactuca sativa
Lsat_1_v5_gn_6_109860 10.0kb downstream 10.0kb downstream 15249   true Lsat_1_v8_lg_6: 181574829-181590077 Lactuca sativa
Lsat_1_v5_gn_6_109860 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 181580078-181590077 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469817 5263 Asterids View MSA
123738224 5271 Pentapetalae View MSA
122792330 5272 Eudicot View MSA
122043794 5273 Angiosperm View MSA
121345189 5274 Embryophyte View MSA
123425999 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain