Gene : Lsat_1_v5_gn_6_109741 L. sativa V8
Defline:  (1 of 1) PTHR23086:SF33 - PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 1-RELATED Genomic Order:  3180
Name:  ? Lsat_1_v5_gn_6_109741 Secondary Identifier:  ? PAC:38938028
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-6351 Lactuca sativa pathologic  
Lsativa PWY-6352 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_109741 0.5kb upstream 0.5kb upstream 4624   true Lsat_1_v8_lg_6: 181413238-181417861 Lactuca sativa
Lsat_1_v5_gn_6_109741 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 181417362-181417861 Lactuca sativa
Lsat_1_v5_gn_6_109741 0.5kb downstream 0.5kb downstream 4624   true Lsat_1_v8_lg_6: 181412738-181417361 Lactuca sativa
Lsat_1_v5_gn_6_109741 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 181412738-181413237 Lactuca sativa
Lsat_1_v5_gn_6_109741 1.0kb upstream 1.0kb upstream 5124   true Lsat_1_v8_lg_6: 181413238-181418361 Lactuca sativa
Lsat_1_v5_gn_6_109741 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 181417362-181418361 Lactuca sativa
Lsat_1_v5_gn_6_109741 1.0kb downstream 1.0kb downstream 5124   true Lsat_1_v8_lg_6: 181412238-181417361 Lactuca sativa
Lsat_1_v5_gn_6_109741 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 181412238-181413237 Lactuca sativa
Lsat_1_v5_gn_6_109741 2.0kb upstream 2.0kb upstream 6124   true Lsat_1_v8_lg_6: 181413238-181419361 Lactuca sativa
Lsat_1_v5_gn_6_109741 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 181417362-181419361 Lactuca sativa
Lsat_1_v5_gn_6_109741 2.0kb downstream 2.0kb downstream 6124   true Lsat_1_v8_lg_6: 181411238-181417361 Lactuca sativa
Lsat_1_v5_gn_6_109741 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 181411238-181413237 Lactuca sativa
Lsat_1_v5_gn_6_109741 5.0kb upstream 5.0kb upstream 9124   true Lsat_1_v8_lg_6: 181413238-181422361 Lactuca sativa
Lsat_1_v5_gn_6_109741 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 181417362-181422361 Lactuca sativa
Lsat_1_v5_gn_6_109741 5.0kb downstream 5.0kb downstream 9124   true Lsat_1_v8_lg_6: 181408238-181417361 Lactuca sativa
Lsat_1_v5_gn_6_109741 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 181408238-181413237 Lactuca sativa
Lsat_1_v5_gn_6_109741 10.0kb upstream 10.0kb upstream 14124   true Lsat_1_v8_lg_6: 181413238-181427361 Lactuca sativa
Lsat_1_v5_gn_6_109741 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 181417362-181427361 Lactuca sativa
Lsat_1_v5_gn_6_109741 10.0kb downstream 10.0kb downstream 14124   true Lsat_1_v8_lg_6: 181403238-181417361 Lactuca sativa
Lsat_1_v5_gn_6_109741 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 181403238-181413237 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470188 5263 Asterids View MSA
123746948 5271 Pentapetalae View MSA
122794503 5272 Eudicot View MSA
122045455 5273 Angiosperm View MSA
121310450 5274 Embryophyte View MSA
123428791 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain