Gene : Lsat_1_v5_gn_6_115300 L. sativa V8
Defline:  (1 of 3) PTHR23316//PTHR23316:SF22 - IMPORTIN ALPHA // ARMADILLO/BETA-CATENIN-LIKE REPEATS-CONTAINING PROTEIN-RELATED Genomic Order:  3338
Name:  ? Lsat_1_v5_gn_6_115300 Secondary Identifier:  ? PAC:38937694
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_115300 0.5kb upstream 0.5kb upstream 4625   true Lsat_1_v8_lg_6: 188228922-188233546 Lactuca sativa
Lsat_1_v5_gn_6_115300 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 188233047-188233546 Lactuca sativa
Lsat_1_v5_gn_6_115300 0.5kb downstream 0.5kb downstream 4625   true Lsat_1_v8_lg_6: 188228422-188233046 Lactuca sativa
Lsat_1_v5_gn_6_115300 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 188228422-188228921 Lactuca sativa
Lsat_1_v5_gn_6_115300 1.0kb upstream 1.0kb upstream 5125   true Lsat_1_v8_lg_6: 188228922-188234046 Lactuca sativa
Lsat_1_v5_gn_6_115300 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 188233047-188234046 Lactuca sativa
Lsat_1_v5_gn_6_115300 1.0kb downstream 1.0kb downstream 5125   true Lsat_1_v8_lg_6: 188227922-188233046 Lactuca sativa
Lsat_1_v5_gn_6_115300 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 188227922-188228921 Lactuca sativa
Lsat_1_v5_gn_6_115300 2.0kb upstream 2.0kb upstream 6125   true Lsat_1_v8_lg_6: 188228922-188235046 Lactuca sativa
Lsat_1_v5_gn_6_115300 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 188233047-188235046 Lactuca sativa
Lsat_1_v5_gn_6_115300 2.0kb downstream 2.0kb downstream 6125   true Lsat_1_v8_lg_6: 188226922-188233046 Lactuca sativa
Lsat_1_v5_gn_6_115300 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 188226922-188228921 Lactuca sativa
Lsat_1_v5_gn_6_115300 5.0kb upstream 5.0kb upstream 9125   true Lsat_1_v8_lg_6: 188228922-188238046 Lactuca sativa
Lsat_1_v5_gn_6_115300 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 188233047-188238046 Lactuca sativa
Lsat_1_v5_gn_6_115300 5.0kb downstream 5.0kb downstream 9125   true Lsat_1_v8_lg_6: 188223922-188233046 Lactuca sativa
Lsat_1_v5_gn_6_115300 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 188223922-188228921 Lactuca sativa
Lsat_1_v5_gn_6_115300 10.0kb upstream 10.0kb upstream 14125   true Lsat_1_v8_lg_6: 188228922-188243046 Lactuca sativa
Lsat_1_v5_gn_6_115300 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 188233047-188243046 Lactuca sativa
Lsat_1_v5_gn_6_115300 10.0kb downstream 10.0kb downstream 14125   true Lsat_1_v8_lg_6: 188218922-188233046 Lactuca sativa
Lsat_1_v5_gn_6_115300 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 188218922-188228921 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041121 5273 Angiosperm View MSA
121476921 5263 Asterids View MSA
123750756 5271 Pentapetalae View MSA
122792283 5272 Eudicot View MSA
121348544 5274 Embryophyte View MSA
123424377 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain