Gene : Lsat_1_v5_gn_6_116081 L. sativa V8
Defline:  (1 of 2) PTHR20994:SF0 - ER MEMBRANE PROTEIN COMPLEX SUBUNIT 6 Genomic Order:  3383
Name:  ? Lsat_1_v5_gn_6_116081 Secondary Identifier:  ? PAC:38936782
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_116081 0.5kb upstream 0.5kb upstream 10645   true Lsat_1_v8_lg_6: 190613108-190623752 Lactuca sativa
Lsat_1_v5_gn_6_116081 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 190623253-190623752 Lactuca sativa
Lsat_1_v5_gn_6_116081 0.5kb downstream 0.5kb downstream 10645   true Lsat_1_v8_lg_6: 190612608-190623252 Lactuca sativa
Lsat_1_v5_gn_6_116081 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 190612608-190613107 Lactuca sativa
Lsat_1_v5_gn_6_116081 1.0kb upstream 1.0kb upstream 11145   true Lsat_1_v8_lg_6: 190613108-190624252 Lactuca sativa
Lsat_1_v5_gn_6_116081 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 190623253-190624252 Lactuca sativa
Lsat_1_v5_gn_6_116081 1.0kb downstream 1.0kb downstream 11145   true Lsat_1_v8_lg_6: 190612108-190623252 Lactuca sativa
Lsat_1_v5_gn_6_116081 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 190612108-190613107 Lactuca sativa
Lsat_1_v5_gn_6_116081 2.0kb upstream 2.0kb upstream 12145   true Lsat_1_v8_lg_6: 190613108-190625252 Lactuca sativa
Lsat_1_v5_gn_6_116081 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 190623253-190625252 Lactuca sativa
Lsat_1_v5_gn_6_116081 2.0kb downstream 2.0kb downstream 12145   true Lsat_1_v8_lg_6: 190611108-190623252 Lactuca sativa
Lsat_1_v5_gn_6_116081 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 190611108-190613107 Lactuca sativa
Lsat_1_v5_gn_6_116081 5.0kb upstream 5.0kb upstream 15145   true Lsat_1_v8_lg_6: 190613108-190628252 Lactuca sativa
Lsat_1_v5_gn_6_116081 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 190623253-190628252 Lactuca sativa
Lsat_1_v5_gn_6_116081 5.0kb downstream 5.0kb downstream 15145   true Lsat_1_v8_lg_6: 190608108-190623252 Lactuca sativa
Lsat_1_v5_gn_6_116081 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 190608108-190613107 Lactuca sativa
Lsat_1_v5_gn_6_116081 10.0kb upstream 10.0kb upstream 20145   true Lsat_1_v8_lg_6: 190613108-190633252 Lactuca sativa
Lsat_1_v5_gn_6_116081 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 190623253-190633252 Lactuca sativa
Lsat_1_v5_gn_6_116081 10.0kb downstream 10.0kb downstream 20145   true Lsat_1_v8_lg_6: 190603108-190623252 Lactuca sativa
Lsat_1_v5_gn_6_116081 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 190603108-190613107 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041108 5273 Angiosperm View MSA
121474015 5263 Asterids View MSA
123746962 5271 Pentapetalae View MSA
122786107 5272 Eudicot View MSA
121346930 5274 Embryophyte View MSA
123425261 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain