Gene : Lsat_1_v5_gn_6_47400 L. sativa V8
Defline:  (1 of 6) K19045 - E3 ubiquitin-protein ligase BIG BROTHER and related proteins [EC:6.3.2.19] (BB) Genomic Order:  1448
Name:  ? Lsat_1_v5_gn_6_47400 Secondary Identifier:  ? PAC:38940325
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_47400 0.5kb upstream 0.5kb upstream 3285   true Lsat_1_v8_lg_6: 65879568-65882852 Lactuca sativa
Lsat_1_v5_gn_6_47400 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 65882353-65882852 Lactuca sativa
Lsat_1_v5_gn_6_47400 0.5kb downstream 0.5kb downstream 3285   true Lsat_1_v8_lg_6: 65879068-65882352 Lactuca sativa
Lsat_1_v5_gn_6_47400 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 65879068-65879567 Lactuca sativa
Lsat_1_v5_gn_6_47400 1.0kb upstream 1.0kb upstream 3785   true Lsat_1_v8_lg_6: 65879568-65883352 Lactuca sativa
Lsat_1_v5_gn_6_47400 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 65882353-65883352 Lactuca sativa
Lsat_1_v5_gn_6_47400 1.0kb downstream 1.0kb downstream 3785   true Lsat_1_v8_lg_6: 65878568-65882352 Lactuca sativa
Lsat_1_v5_gn_6_47400 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 65878568-65879567 Lactuca sativa
Lsat_1_v5_gn_6_47400 2.0kb upstream 2.0kb upstream 4785   true Lsat_1_v8_lg_6: 65879568-65884352 Lactuca sativa
Lsat_1_v5_gn_6_47400 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 65882353-65884352 Lactuca sativa
Lsat_1_v5_gn_6_47400 2.0kb downstream 2.0kb downstream 4785   true Lsat_1_v8_lg_6: 65877568-65882352 Lactuca sativa
Lsat_1_v5_gn_6_47400 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 65877568-65879567 Lactuca sativa
Lsat_1_v5_gn_6_47400 5.0kb upstream 5.0kb upstream 7785   true Lsat_1_v8_lg_6: 65879568-65887352 Lactuca sativa
Lsat_1_v5_gn_6_47400 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 65882353-65887352 Lactuca sativa
Lsat_1_v5_gn_6_47400 5.0kb downstream 5.0kb downstream 7785   true Lsat_1_v8_lg_6: 65874568-65882352 Lactuca sativa
Lsat_1_v5_gn_6_47400 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 65874568-65879567 Lactuca sativa
Lsat_1_v5_gn_6_47400 10.0kb upstream 10.0kb upstream 12785   true Lsat_1_v8_lg_6: 65879568-65892352 Lactuca sativa
Lsat_1_v5_gn_6_47400 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 65882353-65892352 Lactuca sativa
Lsat_1_v5_gn_6_47400 10.0kb downstream 10.0kb downstream 12785   true Lsat_1_v8_lg_6: 65869568-65882352 Lactuca sativa
Lsat_1_v5_gn_6_47400 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 65869568-65879567 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466600 5263 Asterids View MSA
123752046 5271 Pentapetalae View MSA
122792578 5272 Eudicot View MSA
122048358 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121310941 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain