Gene : Lsat_1_v5_gn_6_4901 L. sativa V8
Defline:  (1 of 3) PTHR11850//PTHR11850:SF120 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // HOMEOBOX PROTEIN BEL1 HOMOLOG Genomic Order:  120
Name:  ? Lsat_1_v5_gn_6_4901 Secondary Identifier:  ? PAC:38939350
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_4901 0.5kb upstream 0.5kb upstream 3966   true Lsat_1_v8_lg_6: 7715408-7719373 Lactuca sativa
Lsat_1_v5_gn_6_4901 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 7715408-7715907 Lactuca sativa
Lsat_1_v5_gn_6_4901 0.5kb downstream 0.5kb downstream 3966   true Lsat_1_v8_lg_6: 7715908-7719873 Lactuca sativa
Lsat_1_v5_gn_6_4901 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 7719374-7719873 Lactuca sativa
Lsat_1_v5_gn_6_4901 1.0kb upstream 1.0kb upstream 4466   true Lsat_1_v8_lg_6: 7714908-7719373 Lactuca sativa
Lsat_1_v5_gn_6_4901 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 7714908-7715907 Lactuca sativa
Lsat_1_v5_gn_6_4901 1.0kb downstream 1.0kb downstream 4466   true Lsat_1_v8_lg_6: 7715908-7720373 Lactuca sativa
Lsat_1_v5_gn_6_4901 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 7719374-7720373 Lactuca sativa
Lsat_1_v5_gn_6_4901 2.0kb upstream 2.0kb upstream 5466   true Lsat_1_v8_lg_6: 7713908-7719373 Lactuca sativa
Lsat_1_v5_gn_6_4901 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 7713908-7715907 Lactuca sativa
Lsat_1_v5_gn_6_4901 2.0kb downstream 2.0kb downstream 5466   true Lsat_1_v8_lg_6: 7715908-7721373 Lactuca sativa
Lsat_1_v5_gn_6_4901 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 7719374-7721373 Lactuca sativa
Lsat_1_v5_gn_6_4901 5.0kb upstream 5.0kb upstream 8466   true Lsat_1_v8_lg_6: 7710908-7719373 Lactuca sativa
Lsat_1_v5_gn_6_4901 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 7710908-7715907 Lactuca sativa
Lsat_1_v5_gn_6_4901 5.0kb downstream 5.0kb downstream 8466   true Lsat_1_v8_lg_6: 7715908-7724373 Lactuca sativa
Lsat_1_v5_gn_6_4901 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 7719374-7724373 Lactuca sativa
Lsat_1_v5_gn_6_4901 10.0kb upstream 10.0kb upstream 13466   true Lsat_1_v8_lg_6: 7705908-7719373 Lactuca sativa
Lsat_1_v5_gn_6_4901 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 7705908-7715907 Lactuca sativa
Lsat_1_v5_gn_6_4901 10.0kb downstream 10.0kb downstream 13466   true Lsat_1_v8_lg_6: 7715908-7729373 Lactuca sativa
Lsat_1_v5_gn_6_4901 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 7719374-7729373 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474305 5263 Asterids View MSA
123740482 5271 Pentapetalae View MSA
122791610 5272 Eudicot View MSA
122049932 5273 Angiosperm View MSA
121350603 5274 Embryophyte View MSA
123426094 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain