Gene : Lsat_1_v5_gn_6_48320 L. sativa V8
Defline:  (1 of 4) PTHR31810:SF6 - METACASPASE-4-RELATED Genomic Order:  1467
Name:  ? Lsat_1_v5_gn_6_48320 Secondary Identifier:  ? PAC:38938763
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_48320 0.5kb upstream 0.5kb upstream 842   true Lsat_1_v8_lg_6: 67944857-67945698 Lactuca sativa
Lsat_1_v5_gn_6_48320 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 67944857-67945356 Lactuca sativa
Lsat_1_v5_gn_6_48320 0.5kb downstream 0.5kb downstream 842   true Lsat_1_v8_lg_6: 67945357-67946198 Lactuca sativa
Lsat_1_v5_gn_6_48320 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 67945699-67946198 Lactuca sativa
Lsat_1_v5_gn_6_48320 1.0kb upstream 1.0kb upstream 1342   true Lsat_1_v8_lg_6: 67944357-67945698 Lactuca sativa
Lsat_1_v5_gn_6_48320 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 67944357-67945356 Lactuca sativa
Lsat_1_v5_gn_6_48320 1.0kb downstream 1.0kb downstream 1342   true Lsat_1_v8_lg_6: 67945357-67946698 Lactuca sativa
Lsat_1_v5_gn_6_48320 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 67945699-67946698 Lactuca sativa
Lsat_1_v5_gn_6_48320 2.0kb upstream 2.0kb upstream 2342   true Lsat_1_v8_lg_6: 67943357-67945698 Lactuca sativa
Lsat_1_v5_gn_6_48320 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 67943357-67945356 Lactuca sativa
Lsat_1_v5_gn_6_48320 2.0kb downstream 2.0kb downstream 2342   true Lsat_1_v8_lg_6: 67945357-67947698 Lactuca sativa
Lsat_1_v5_gn_6_48320 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 67945699-67947698 Lactuca sativa
Lsat_1_v5_gn_6_48320 5.0kb upstream 5.0kb upstream 5342   true Lsat_1_v8_lg_6: 67940357-67945698 Lactuca sativa
Lsat_1_v5_gn_6_48320 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 67940357-67945356 Lactuca sativa
Lsat_1_v5_gn_6_48320 5.0kb downstream 5.0kb downstream 5342   true Lsat_1_v8_lg_6: 67945357-67950698 Lactuca sativa
Lsat_1_v5_gn_6_48320 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 67945699-67950698 Lactuca sativa
Lsat_1_v5_gn_6_48320 10.0kb upstream 10.0kb upstream 10342   true Lsat_1_v8_lg_6: 67935357-67945698 Lactuca sativa
Lsat_1_v5_gn_6_48320 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 67935357-67945356 Lactuca sativa
Lsat_1_v5_gn_6_48320 10.0kb downstream 10.0kb downstream 10342   true Lsat_1_v8_lg_6: 67945357-67955698 Lactuca sativa
Lsat_1_v5_gn_6_48320 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 67945699-67955698 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028307 5273 Angiosperm View MSA
121446513 5263 Asterids Singleton cluster - no MSA
123748533 5271 Pentapetalae View MSA
122772675 5272 Eudicot View MSA
123428899 5275 Viridiplantae View MSA
121350269 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain