Gene : Lsat_1_v5_gn_6_50280 L. sativa V8
Defline:  (1 of 1) PF00132//PF00501//PF00550//PF01593//PF08263 - Bacterial transferase hexapeptide (six repeats) (Hexapep) // AMP-binding enzyme (AMP-binding) // Phosphopantetheine attachment site (PP-binding) // Flavin containing amine oxidoreductase (Amino_oxidase) // Leucine rich repeat N-terminal domain (LRRNT_2) Genomic Order:  1484
Name:  ? Lsat_1_v5_gn_6_50280 Secondary Identifier:  ? PAC:38937165
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_50280 0.5kb upstream 0.5kb upstream 11313   true Lsat_1_v8_lg_6: 68829938-68841250 Lactuca sativa
Lsat_1_v5_gn_6_50280 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 68829938-68830437 Lactuca sativa
Lsat_1_v5_gn_6_50280 0.5kb downstream 0.5kb downstream 11313   true Lsat_1_v8_lg_6: 68830438-68841750 Lactuca sativa
Lsat_1_v5_gn_6_50280 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 68841251-68841750 Lactuca sativa
Lsat_1_v5_gn_6_50280 1.0kb upstream 1.0kb upstream 11813   true Lsat_1_v8_lg_6: 68829438-68841250 Lactuca sativa
Lsat_1_v5_gn_6_50280 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 68829438-68830437 Lactuca sativa
Lsat_1_v5_gn_6_50280 1.0kb downstream 1.0kb downstream 11813   true Lsat_1_v8_lg_6: 68830438-68842250 Lactuca sativa
Lsat_1_v5_gn_6_50280 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 68841251-68842250 Lactuca sativa
Lsat_1_v5_gn_6_50280 2.0kb upstream 2.0kb upstream 12813   true Lsat_1_v8_lg_6: 68828438-68841250 Lactuca sativa
Lsat_1_v5_gn_6_50280 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 68828438-68830437 Lactuca sativa
Lsat_1_v5_gn_6_50280 2.0kb downstream 2.0kb downstream 12813   true Lsat_1_v8_lg_6: 68830438-68843250 Lactuca sativa
Lsat_1_v5_gn_6_50280 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 68841251-68843250 Lactuca sativa
Lsat_1_v5_gn_6_50280 5.0kb upstream 5.0kb upstream 15813   true Lsat_1_v8_lg_6: 68825438-68841250 Lactuca sativa
Lsat_1_v5_gn_6_50280 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 68825438-68830437 Lactuca sativa
Lsat_1_v5_gn_6_50280 5.0kb downstream 5.0kb downstream 15813   true Lsat_1_v8_lg_6: 68830438-68846250 Lactuca sativa
Lsat_1_v5_gn_6_50280 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 68841251-68846250 Lactuca sativa
Lsat_1_v5_gn_6_50280 10.0kb upstream 10.0kb upstream 20813   true Lsat_1_v8_lg_6: 68820438-68841250 Lactuca sativa
Lsat_1_v5_gn_6_50280 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 68820438-68830437 Lactuca sativa
Lsat_1_v5_gn_6_50280 10.0kb downstream 10.0kb downstream 20813   true Lsat_1_v8_lg_6: 68830438-68851250 Lactuca sativa
Lsat_1_v5_gn_6_50280 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 68841251-68851250 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481960 5263 Asterids View MSA
123748036 5271 Pentapetalae View MSA
122772408 5272 Eudicot View MSA
122048169 5273 Angiosperm View MSA
121310872 5274 Embryophyte View MSA
123426250 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain