Gene : Lsat_1_v5_gn_6_52101 L. sativa V8
Defline:  (1 of 2) PTHR11785//PTHR11785:SF378 - AMINO ACID TRANSPORTER // SUBFAMILY NOT NAMED Genomic Order:  1574
Name:  ? Lsat_1_v5_gn_6_52101 Secondary Identifier:  ? PAC:38941478
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_52101 0.5kb upstream 0.5kb upstream 2343   true Lsat_1_v8_lg_6: 73663526-73665868 Lactuca sativa
Lsat_1_v5_gn_6_52101 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 73663526-73664025 Lactuca sativa
Lsat_1_v5_gn_6_52101 0.5kb downstream 0.5kb downstream 2343   true Lsat_1_v8_lg_6: 73664026-73666368 Lactuca sativa
Lsat_1_v5_gn_6_52101 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 73665869-73666368 Lactuca sativa
Lsat_1_v5_gn_6_52101 1.0kb upstream 1.0kb upstream 2843   true Lsat_1_v8_lg_6: 73663026-73665868 Lactuca sativa
Lsat_1_v5_gn_6_52101 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 73663026-73664025 Lactuca sativa
Lsat_1_v5_gn_6_52101 1.0kb downstream 1.0kb downstream 2843   true Lsat_1_v8_lg_6: 73664026-73666868 Lactuca sativa
Lsat_1_v5_gn_6_52101 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 73665869-73666868 Lactuca sativa
Lsat_1_v5_gn_6_52101 2.0kb upstream 2.0kb upstream 3843   true Lsat_1_v8_lg_6: 73662026-73665868 Lactuca sativa
Lsat_1_v5_gn_6_52101 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 73662026-73664025 Lactuca sativa
Lsat_1_v5_gn_6_52101 2.0kb downstream 2.0kb downstream 3843   true Lsat_1_v8_lg_6: 73664026-73667868 Lactuca sativa
Lsat_1_v5_gn_6_52101 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 73665869-73667868 Lactuca sativa
Lsat_1_v5_gn_6_52101 5.0kb upstream 5.0kb upstream 6843   true Lsat_1_v8_lg_6: 73659026-73665868 Lactuca sativa
Lsat_1_v5_gn_6_52101 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 73659026-73664025 Lactuca sativa
Lsat_1_v5_gn_6_52101 5.0kb downstream 5.0kb downstream 6843   true Lsat_1_v8_lg_6: 73664026-73670868 Lactuca sativa
Lsat_1_v5_gn_6_52101 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 73665869-73670868 Lactuca sativa
Lsat_1_v5_gn_6_52101 10.0kb upstream 10.0kb upstream 11843   true Lsat_1_v8_lg_6: 73654026-73665868 Lactuca sativa
Lsat_1_v5_gn_6_52101 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 73654026-73664025 Lactuca sativa
Lsat_1_v5_gn_6_52101 10.0kb downstream 10.0kb downstream 11843   true Lsat_1_v8_lg_6: 73664026-73675868 Lactuca sativa
Lsat_1_v5_gn_6_52101 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 73665869-73675868 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471413 5263 Asterids View MSA
123751065 5271 Pentapetalae View MSA
122791339 5272 Eudicot View MSA
122044006 5273 Angiosperm View MSA
121310225 5274 Embryophyte View MSA
123347773 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain