Gene : Lsat_1_v5_gn_6_53141 L. sativa V8
Defline:  (1 of 1) 3.4.22.54 - Calpain-3 / Muscle-specific calcium-activated neutral protease 3 Genomic Order:  1630
Name:  ? Lsat_1_v5_gn_6_53141 Secondary Identifier:  ? PAC:38936594
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_53141 0.5kb upstream 0.5kb upstream 19244   true Lsat_1_v8_lg_6: 75772654-75791897 Lactuca sativa
Lsat_1_v5_gn_6_53141 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 75791398-75791897 Lactuca sativa
Lsat_1_v5_gn_6_53141 0.5kb downstream 0.5kb downstream 19244   true Lsat_1_v8_lg_6: 75772154-75791397 Lactuca sativa
Lsat_1_v5_gn_6_53141 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 75772154-75772653 Lactuca sativa
Lsat_1_v5_gn_6_53141 1.0kb upstream 1.0kb upstream 19744   true Lsat_1_v8_lg_6: 75772654-75792397 Lactuca sativa
Lsat_1_v5_gn_6_53141 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 75791398-75792397 Lactuca sativa
Lsat_1_v5_gn_6_53141 1.0kb downstream 1.0kb downstream 19744   true Lsat_1_v8_lg_6: 75771654-75791397 Lactuca sativa
Lsat_1_v5_gn_6_53141 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 75771654-75772653 Lactuca sativa
Lsat_1_v5_gn_6_53141 2.0kb upstream 2.0kb upstream 20744   true Lsat_1_v8_lg_6: 75772654-75793397 Lactuca sativa
Lsat_1_v5_gn_6_53141 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 75791398-75793397 Lactuca sativa
Lsat_1_v5_gn_6_53141 2.0kb downstream 2.0kb downstream 20744   true Lsat_1_v8_lg_6: 75770654-75791397 Lactuca sativa
Lsat_1_v5_gn_6_53141 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 75770654-75772653 Lactuca sativa
Lsat_1_v5_gn_6_53141 5.0kb upstream 5.0kb upstream 23744   true Lsat_1_v8_lg_6: 75772654-75796397 Lactuca sativa
Lsat_1_v5_gn_6_53141 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 75791398-75796397 Lactuca sativa
Lsat_1_v5_gn_6_53141 5.0kb downstream 5.0kb downstream 23744   true Lsat_1_v8_lg_6: 75767654-75791397 Lactuca sativa
Lsat_1_v5_gn_6_53141 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 75767654-75772653 Lactuca sativa
Lsat_1_v5_gn_6_53141 10.0kb upstream 10.0kb upstream 28744   true Lsat_1_v8_lg_6: 75772654-75801397 Lactuca sativa
Lsat_1_v5_gn_6_53141 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 75791398-75801397 Lactuca sativa
Lsat_1_v5_gn_6_53141 10.0kb downstream 10.0kb downstream 28744   true Lsat_1_v8_lg_6: 75762654-75791397 Lactuca sativa
Lsat_1_v5_gn_6_53141 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 75762654-75772653 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472253 5263 Asterids View MSA
123739465 5271 Pentapetalae View MSA
122788693 5272 Eudicot View MSA
122043542 5273 Angiosperm View MSA
121345747 5274 Embryophyte View MSA
123380263 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain