Gene : Lsat_1_v5_gn_6_52680 L. sativa V8
Defline:  (1 of 3) PF02985//PF13646 - HEAT repeat (HEAT) // HEAT repeats (HEAT_2) Genomic Order:  1617
Name:  ? Lsat_1_v5_gn_6_52680 Secondary Identifier:  ? PAC:38939510
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_52680 0.5kb upstream 0.5kb upstream 6626   true Lsat_1_v8_lg_6: 75180242-75186867 Lactuca sativa
Lsat_1_v5_gn_6_52680 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 75180242-75180741 Lactuca sativa
Lsat_1_v5_gn_6_52680 0.5kb downstream 0.5kb downstream 6626   true Lsat_1_v8_lg_6: 75180742-75187367 Lactuca sativa
Lsat_1_v5_gn_6_52680 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 75186868-75187367 Lactuca sativa
Lsat_1_v5_gn_6_52680 1.0kb upstream 1.0kb upstream 7126   true Lsat_1_v8_lg_6: 75179742-75186867 Lactuca sativa
Lsat_1_v5_gn_6_52680 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 75179742-75180741 Lactuca sativa
Lsat_1_v5_gn_6_52680 1.0kb downstream 1.0kb downstream 7126   true Lsat_1_v8_lg_6: 75180742-75187867 Lactuca sativa
Lsat_1_v5_gn_6_52680 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 75186868-75187867 Lactuca sativa
Lsat_1_v5_gn_6_52680 2.0kb upstream 2.0kb upstream 8126   true Lsat_1_v8_lg_6: 75178742-75186867 Lactuca sativa
Lsat_1_v5_gn_6_52680 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 75178742-75180741 Lactuca sativa
Lsat_1_v5_gn_6_52680 2.0kb downstream 2.0kb downstream 8126   true Lsat_1_v8_lg_6: 75180742-75188867 Lactuca sativa
Lsat_1_v5_gn_6_52680 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 75186868-75188867 Lactuca sativa
Lsat_1_v5_gn_6_52680 5.0kb upstream 5.0kb upstream 11126   true Lsat_1_v8_lg_6: 75175742-75186867 Lactuca sativa
Lsat_1_v5_gn_6_52680 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 75175742-75180741 Lactuca sativa
Lsat_1_v5_gn_6_52680 5.0kb downstream 5.0kb downstream 11126   true Lsat_1_v8_lg_6: 75180742-75191867 Lactuca sativa
Lsat_1_v5_gn_6_52680 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 75186868-75191867 Lactuca sativa
Lsat_1_v5_gn_6_52680 10.0kb upstream 10.0kb upstream 16126   true Lsat_1_v8_lg_6: 75170742-75186867 Lactuca sativa
Lsat_1_v5_gn_6_52680 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 75170742-75180741 Lactuca sativa
Lsat_1_v5_gn_6_52680 10.0kb downstream 10.0kb downstream 16126   true Lsat_1_v8_lg_6: 75180742-75196867 Lactuca sativa
Lsat_1_v5_gn_6_52680 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 75186868-75196867 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477301 5263 Asterids View MSA
123743954 5271 Pentapetalae View MSA
122786465 5272 Eudicot View MSA
122043271 5273 Angiosperm View MSA
121344814 5274 Embryophyte View MSA
123426355 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain