Gene : Lsat_1_v5_gn_6_56101 L. sativa V8
Defline:  (1 of 4) PTHR22763//PTHR22763:SF59 - RING ZINC FINGER PROTEIN // GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MRP15 Genomic Order:  1659
Name:  ? Lsat_1_v5_gn_6_56101 Secondary Identifier:  ? PAC:38942051
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-7511 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_56101 0.5kb upstream 0.5kb upstream 2553   true Lsat_1_v8_lg_6: 76850097-76852649 Lactuca sativa
Lsat_1_v5_gn_6_56101 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 76850097-76850596 Lactuca sativa
Lsat_1_v5_gn_6_56101 0.5kb downstream 0.5kb downstream 2553   true Lsat_1_v8_lg_6: 76850597-76853149 Lactuca sativa
Lsat_1_v5_gn_6_56101 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 76852650-76853149 Lactuca sativa
Lsat_1_v5_gn_6_56101 1.0kb upstream 1.0kb upstream 3053   true Lsat_1_v8_lg_6: 76849597-76852649 Lactuca sativa
Lsat_1_v5_gn_6_56101 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 76849597-76850596 Lactuca sativa
Lsat_1_v5_gn_6_56101 1.0kb downstream 1.0kb downstream 3053   true Lsat_1_v8_lg_6: 76850597-76853649 Lactuca sativa
Lsat_1_v5_gn_6_56101 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 76852650-76853649 Lactuca sativa
Lsat_1_v5_gn_6_56101 2.0kb upstream 2.0kb upstream 4053   true Lsat_1_v8_lg_6: 76848597-76852649 Lactuca sativa
Lsat_1_v5_gn_6_56101 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 76848597-76850596 Lactuca sativa
Lsat_1_v5_gn_6_56101 2.0kb downstream 2.0kb downstream 4053   true Lsat_1_v8_lg_6: 76850597-76854649 Lactuca sativa
Lsat_1_v5_gn_6_56101 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 76852650-76854649 Lactuca sativa
Lsat_1_v5_gn_6_56101 5.0kb upstream 5.0kb upstream 7053   true Lsat_1_v8_lg_6: 76845597-76852649 Lactuca sativa
Lsat_1_v5_gn_6_56101 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 76845597-76850596 Lactuca sativa
Lsat_1_v5_gn_6_56101 5.0kb downstream 5.0kb downstream 7053   true Lsat_1_v8_lg_6: 76850597-76857649 Lactuca sativa
Lsat_1_v5_gn_6_56101 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 76852650-76857649 Lactuca sativa
Lsat_1_v5_gn_6_56101 10.0kb upstream 10.0kb upstream 12053   true Lsat_1_v8_lg_6: 76840597-76852649 Lactuca sativa
Lsat_1_v5_gn_6_56101 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 76840597-76850596 Lactuca sativa
Lsat_1_v5_gn_6_56101 10.0kb downstream 10.0kb downstream 12053   true Lsat_1_v8_lg_6: 76850597-76862649 Lactuca sativa
Lsat_1_v5_gn_6_56101 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 76852650-76862649 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480845 5263 Asterids View MSA
123753393 5271 Pentapetalae View MSA
122788391 5272 Eudicot View MSA
122050385 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121349521 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain