Gene : Lsat_1_v5_gn_6_57320 L. sativa V8
Defline:  (1 of 2) PTHR24349//PTHR24349:SF160 - SERINE/THREONINE-PROTEIN KINASE // CALCIUM-DEPENDENT PROTEIN KINASE 24 Genomic Order:  1709
Name:  ? Lsat_1_v5_gn_6_57320 Secondary Identifier:  ? PAC:38940631
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_57320 0.5kb upstream 0.5kb upstream 9788   true Lsat_1_v8_lg_6: 79829645-79839432 Lactuca sativa
Lsat_1_v5_gn_6_57320 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 79838933-79839432 Lactuca sativa
Lsat_1_v5_gn_6_57320 0.5kb downstream 0.5kb downstream 9788   true Lsat_1_v8_lg_6: 79829145-79838932 Lactuca sativa
Lsat_1_v5_gn_6_57320 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 79829145-79829644 Lactuca sativa
Lsat_1_v5_gn_6_57320 1.0kb upstream 1.0kb upstream 10288   true Lsat_1_v8_lg_6: 79829645-79839932 Lactuca sativa
Lsat_1_v5_gn_6_57320 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 79838933-79839932 Lactuca sativa
Lsat_1_v5_gn_6_57320 1.0kb downstream 1.0kb downstream 10288   true Lsat_1_v8_lg_6: 79828645-79838932 Lactuca sativa
Lsat_1_v5_gn_6_57320 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 79828645-79829644 Lactuca sativa
Lsat_1_v5_gn_6_57320 2.0kb upstream 2.0kb upstream 11288   true Lsat_1_v8_lg_6: 79829645-79840932 Lactuca sativa
Lsat_1_v5_gn_6_57320 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 79838933-79840932 Lactuca sativa
Lsat_1_v5_gn_6_57320 2.0kb downstream 2.0kb downstream 11288   true Lsat_1_v8_lg_6: 79827645-79838932 Lactuca sativa
Lsat_1_v5_gn_6_57320 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 79827645-79829644 Lactuca sativa
Lsat_1_v5_gn_6_57320 5.0kb upstream 5.0kb upstream 14288   true Lsat_1_v8_lg_6: 79829645-79843932 Lactuca sativa
Lsat_1_v5_gn_6_57320 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 79838933-79843932 Lactuca sativa
Lsat_1_v5_gn_6_57320 5.0kb downstream 5.0kb downstream 14288   true Lsat_1_v8_lg_6: 79824645-79838932 Lactuca sativa
Lsat_1_v5_gn_6_57320 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 79824645-79829644 Lactuca sativa
Lsat_1_v5_gn_6_57320 10.0kb upstream 10.0kb upstream 19288   true Lsat_1_v8_lg_6: 79829645-79848932 Lactuca sativa
Lsat_1_v5_gn_6_57320 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 79838933-79848932 Lactuca sativa
Lsat_1_v5_gn_6_57320 10.0kb downstream 10.0kb downstream 19288   true Lsat_1_v8_lg_6: 79819645-79838932 Lactuca sativa
Lsat_1_v5_gn_6_57320 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 79819645-79829644 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779275 5273 Angiosperm View MSA
121471424 5263 Asterids View MSA
123741772 5271 Pentapetalae View MSA
122770123 5272 Eudicot View MSA
121050948 5274 Embryophyte View MSA
123091056 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain