Gene : Lsat_1_v5_gn_6_5920 L. sativa V8
Defline:  (1 of 4) K17686 - Cu+-exporting ATPase (copA, ATP7) Genomic Order:  176
Name:  ? Lsat_1_v5_gn_6_5920 Secondary Identifier:  ? PAC:38940241
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_5920 0.5kb upstream 0.5kb upstream 4107   true Lsat_1_v8_lg_6: 9318213-9322319 Lactuca sativa
Lsat_1_v5_gn_6_5920 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 9321820-9322319 Lactuca sativa
Lsat_1_v5_gn_6_5920 0.5kb downstream 0.5kb downstream 4107   true Lsat_1_v8_lg_6: 9317713-9321819 Lactuca sativa
Lsat_1_v5_gn_6_5920 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 9317713-9318212 Lactuca sativa
Lsat_1_v5_gn_6_5920 1.0kb upstream 1.0kb upstream 4607   true Lsat_1_v8_lg_6: 9318213-9322819 Lactuca sativa
Lsat_1_v5_gn_6_5920 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 9321820-9322819 Lactuca sativa
Lsat_1_v5_gn_6_5920 1.0kb downstream 1.0kb downstream 4607   true Lsat_1_v8_lg_6: 9317213-9321819 Lactuca sativa
Lsat_1_v5_gn_6_5920 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 9317213-9318212 Lactuca sativa
Lsat_1_v5_gn_6_5920 2.0kb upstream 2.0kb upstream 5607   true Lsat_1_v8_lg_6: 9318213-9323819 Lactuca sativa
Lsat_1_v5_gn_6_5920 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 9321820-9323819 Lactuca sativa
Lsat_1_v5_gn_6_5920 2.0kb downstream 2.0kb downstream 5607   true Lsat_1_v8_lg_6: 9316213-9321819 Lactuca sativa
Lsat_1_v5_gn_6_5920 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 9316213-9318212 Lactuca sativa
Lsat_1_v5_gn_6_5920 5.0kb upstream 5.0kb upstream 8607   true Lsat_1_v8_lg_6: 9318213-9326819 Lactuca sativa
Lsat_1_v5_gn_6_5920 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 9321820-9326819 Lactuca sativa
Lsat_1_v5_gn_6_5920 5.0kb downstream 5.0kb downstream 8607   true Lsat_1_v8_lg_6: 9313213-9321819 Lactuca sativa
Lsat_1_v5_gn_6_5920 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 9313213-9318212 Lactuca sativa
Lsat_1_v5_gn_6_5920 10.0kb upstream 10.0kb upstream 13607   true Lsat_1_v8_lg_6: 9318213-9331819 Lactuca sativa
Lsat_1_v5_gn_6_5920 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 9321820-9331819 Lactuca sativa
Lsat_1_v5_gn_6_5920 10.0kb downstream 10.0kb downstream 13607   true Lsat_1_v8_lg_6: 9308213-9321819 Lactuca sativa
Lsat_1_v5_gn_6_5920 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 9308213-9318212 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475273 5263 Asterids View MSA
123747003 5271 Pentapetalae View MSA
122794490 5272 Eudicot View MSA
122042760 5273 Angiosperm View MSA
121351146 5274 Embryophyte View MSA
123426796 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain