Gene : Lsat_1_v5_gn_6_59181 L. sativa V8
Defline:  (1 of 335) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Genomic Order:  1775
Name:  ? Lsat_1_v5_gn_6_59181 Secondary Identifier:  ? PAC:38939644
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_59181 0.5kb upstream 0.5kb upstream 2921   true Lsat_1_v8_lg_6: 84730822-84733742 Lactuca sativa
Lsat_1_v5_gn_6_59181 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 84733243-84733742 Lactuca sativa
Lsat_1_v5_gn_6_59181 0.5kb downstream 0.5kb downstream 2921   true Lsat_1_v8_lg_6: 84730322-84733242 Lactuca sativa
Lsat_1_v5_gn_6_59181 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 84730322-84730821 Lactuca sativa
Lsat_1_v5_gn_6_59181 1.0kb upstream 1.0kb upstream 3421   true Lsat_1_v8_lg_6: 84730822-84734242 Lactuca sativa
Lsat_1_v5_gn_6_59181 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 84733243-84734242 Lactuca sativa
Lsat_1_v5_gn_6_59181 1.0kb downstream 1.0kb downstream 3421   true Lsat_1_v8_lg_6: 84729822-84733242 Lactuca sativa
Lsat_1_v5_gn_6_59181 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 84729822-84730821 Lactuca sativa
Lsat_1_v5_gn_6_59181 2.0kb upstream 2.0kb upstream 4421   true Lsat_1_v8_lg_6: 84730822-84735242 Lactuca sativa
Lsat_1_v5_gn_6_59181 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 84733243-84735242 Lactuca sativa
Lsat_1_v5_gn_6_59181 2.0kb downstream 2.0kb downstream 4421   true Lsat_1_v8_lg_6: 84728822-84733242 Lactuca sativa
Lsat_1_v5_gn_6_59181 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 84728822-84730821 Lactuca sativa
Lsat_1_v5_gn_6_59181 5.0kb upstream 5.0kb upstream 7421   true Lsat_1_v8_lg_6: 84730822-84738242 Lactuca sativa
Lsat_1_v5_gn_6_59181 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 84733243-84738242 Lactuca sativa
Lsat_1_v5_gn_6_59181 5.0kb downstream 5.0kb downstream 7421   true Lsat_1_v8_lg_6: 84725822-84733242 Lactuca sativa
Lsat_1_v5_gn_6_59181 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 84725822-84730821 Lactuca sativa
Lsat_1_v5_gn_6_59181 10.0kb upstream 10.0kb upstream 12421   true Lsat_1_v8_lg_6: 84730822-84743242 Lactuca sativa
Lsat_1_v5_gn_6_59181 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 84733243-84743242 Lactuca sativa
Lsat_1_v5_gn_6_59181 10.0kb downstream 10.0kb downstream 12421   true Lsat_1_v8_lg_6: 84720822-84733242 Lactuca sativa
Lsat_1_v5_gn_6_59181 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 84720822-84730821 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481645 5263 Asterids View MSA
123747878 5271 Pentapetalae View MSA
122791665 5272 Eudicot View MSA
122044174 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121348177 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain