Gene : Lsat_1_v5_gn_6_60460 L. sativa V8
Defline:  (1 of 1) K03032 - 26S proteasome regulatory subunit N2 (PSMD1, RPN2) Genomic Order:  1793
Name:  ? Lsat_1_v5_gn_6_60460 Secondary Identifier:  ? PAC:38940979
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_60460 0.5kb upstream 0.5kb upstream 7052   true Lsat_1_v8_lg_6: 86387911-86394962 Lactuca sativa
Lsat_1_v5_gn_6_60460 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 86387911-86388410 Lactuca sativa
Lsat_1_v5_gn_6_60460 0.5kb downstream 0.5kb downstream 7052   true Lsat_1_v8_lg_6: 86388411-86395462 Lactuca sativa
Lsat_1_v5_gn_6_60460 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 86394963-86395462 Lactuca sativa
Lsat_1_v5_gn_6_60460 1.0kb upstream 1.0kb upstream 7552   true Lsat_1_v8_lg_6: 86387411-86394962 Lactuca sativa
Lsat_1_v5_gn_6_60460 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 86387411-86388410 Lactuca sativa
Lsat_1_v5_gn_6_60460 1.0kb downstream 1.0kb downstream 7552   true Lsat_1_v8_lg_6: 86388411-86395962 Lactuca sativa
Lsat_1_v5_gn_6_60460 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 86394963-86395962 Lactuca sativa
Lsat_1_v5_gn_6_60460 2.0kb upstream 2.0kb upstream 8552   true Lsat_1_v8_lg_6: 86386411-86394962 Lactuca sativa
Lsat_1_v5_gn_6_60460 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 86386411-86388410 Lactuca sativa
Lsat_1_v5_gn_6_60460 2.0kb downstream 2.0kb downstream 8552   true Lsat_1_v8_lg_6: 86388411-86396962 Lactuca sativa
Lsat_1_v5_gn_6_60460 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 86394963-86396962 Lactuca sativa
Lsat_1_v5_gn_6_60460 5.0kb upstream 5.0kb upstream 11552   true Lsat_1_v8_lg_6: 86383411-86394962 Lactuca sativa
Lsat_1_v5_gn_6_60460 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 86383411-86388410 Lactuca sativa
Lsat_1_v5_gn_6_60460 5.0kb downstream 5.0kb downstream 11552   true Lsat_1_v8_lg_6: 86388411-86399962 Lactuca sativa
Lsat_1_v5_gn_6_60460 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 86394963-86399962 Lactuca sativa
Lsat_1_v5_gn_6_60460 10.0kb upstream 10.0kb upstream 16552   true Lsat_1_v8_lg_6: 86378411-86394962 Lactuca sativa
Lsat_1_v5_gn_6_60460 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 86378411-86388410 Lactuca sativa
Lsat_1_v5_gn_6_60460 10.0kb downstream 10.0kb downstream 16552   true Lsat_1_v8_lg_6: 86388411-86404962 Lactuca sativa
Lsat_1_v5_gn_6_60460 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 86394963-86404962 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041470 5273 Angiosperm View MSA
121469107 5263 Asterids View MSA
123746888 5271 Pentapetalae View MSA
122789074 5272 Eudicot View MSA
121346928 5274 Embryophyte View MSA
123424090 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain